STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A1Y2GL3540S ribosomal protein S4; Belongs to the eukaryotic ribosomal protein eS4 family. (260 aa)    
Predicted Functional Partners:
A0A1Y2GEE5
Putative 40S ribosomal protein RPS3.
  
 0.995
A0A1Y2GQE0
S2 ribosomal protein; Belongs to the universal ribosomal protein uS5 family.
  
 0.995
A0A1Y2G671
40S ribosomal protein S6; Belongs to the eukaryotic ribosomal protein eS6 family.
   
 0.994
RPS0
40S ribosomal protein S0; Required for the assembly and/or stability of the 40S ribosomal subunit. Required for the processing of the 20S rRNA- precursor to mature 18S rRNA in a late step of the maturation of 40S ribosomal subunits.
   
 0.994
A0A1Y2G8T2
40S ribosomal protein S20.
   
 0.994
A0A1Y2GJQ0
P-loop containing nucleoside triphosphate hydrolase protein.
   
   0.994
A0A1Y2GNX2
Armadillo-type protein.
   
   0.994
A0A1Y2GTI7
P-loop containing nucleoside triphosphate hydrolase protein.
   
   0.994
A0A1Y2GUV6
Ribosomal protein S7 domain-containing protein; Belongs to the universal ribosomal protein uS7 family.
   
 0.994
A0A1Y2H114
Armadillo-type protein.
   
   0.994
Your Current Organism:
Lobosporangium transversale
NCBI taxonomy Id: 64571
Other names: ATCC 16960, CBS 357.67, Echinosporangium transversale, IMI 130776ii, L. transversale, NRRL 3116
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