STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A1Y2GPM7Uncharacterized protein. (644 aa)    
Predicted Functional Partners:
A0A1Y2GKU0
C2 domain-containing protein.
    
 0.655
A0A1Y2GMR9
C2 domain-containing protein.
    
 0.655
A0A1Y2H2F8
C2 domain-containing protein.
    
 0.655
A0A1Y2G9H7
Ribosomal protein S27a-domain-containing protein.
    
 0.614
A0A1Y2GGY1
Ribosomal protein S27a-domain-containing protein.
    
 0.614
A0A1Y2GBJ9
Uncharacterized protein.
     
 0.600
A0A1Y2GY92
RlpA-like double-psi beta-barrel-protein domain-containing protein-containing protein.
    
  0.600
A0A1Y2H2M6
Synaptobrevin.
     
 0.598
A0A1Y2GLF0
Ubiquitin-related domain-containing protein.
    
 0.540
A0A1Y2GYB9
Ubiquitin.
    
 0.540
Your Current Organism:
Lobosporangium transversale
NCBI taxonomy Id: 64571
Other names: ATCC 16960, CBS 357.67, Echinosporangium transversale, IMI 130776ii, L. transversale, NRRL 3116
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