STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A1Y2GW78Protein-S-isoprenylcysteine O-methyltransferase; Belongs to the class VI-like SAM-binding methyltransferase superfamily. Isoprenylcysteine carboxyl methyltransferase family. (233 aa)    
Predicted Functional Partners:
A0A1Y2GRX2
NUDIX hydrolase domain-like protein.
   
 0.778
A0A1Y2GXF5
CAAX prenyl protease; Proteolytically removes the C-terminal three residues of farnesylated proteins; Belongs to the peptidase M48A family.
    
 0.680
A0A1Y2G766
Uncharacterized protein.
   
 0.600
A0A1Y2GYT6
Uncharacterized protein.
   
 0.600
A0A1Y2GJ77
Flavokinase domain-containing protein.
     
 0.599
A0A1Y2GWN8
Rhodanese family protein.
    
  0.588
A0A1Y2GYP7
Peptidase family M48-domain-containing protein.
    
 0.559
A0A1Y2H004
Peptidase_M48 domain-containing protein.
    
 0.559
A0A1Y2G8B2
Uncharacterized protein.
    
 0.528
A0A1Y2G8T1
Small GTPase superfamily.
    
 0.528
Your Current Organism:
Lobosporangium transversale
NCBI taxonomy Id: 64571
Other names: ATCC 16960, CBS 357.67, Echinosporangium transversale, IMI 130776ii, L. transversale, NRRL 3116
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