STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SMB83072.1Hypothetical protein; SPTR: A3UAB9 Putative uncharacterized protein. (254 aa)    
Predicted Functional Partners:
SMB88071.1
Hypothetical protein; SPTR: A3UAB8 Putative uncharacterized protein.
  
     0.692
SMB86547.1
KEGG: afw:Anae109_1121 outer membrane chaperone Skp (OmpH); SPTR: A3HY37 Outer membrane protein (OmpH-like); PFAM: outer membrane chaperone Skp (OmpH); InterPro IPR005632.
  
 
   0.555
SMB96615.1
InterPro IPR006665:IPR000297; COGs: COG0760 Parvulin-like peptidyl-prolyl isomerase; KEGG: mgm:Mmc1_2327 PpiC-type peptidyl-prolyl cis-trans isomerase; SPTR: A1ZI74 Putative exported isomerase; PFAM: PpiC-type peptidyl-prolyl cis-trans isomerase; OmpA/MotB domain protein.
  
 
 
 0.538
SMB84477.1
Surface antigen (D15); InterPro IPR000184:IPR010827; COGs: COG4775 Outer membrane protein/protective antigen OMA87; KEGG: eba:ebA1189 hypothetical protein; SPTR: A1ZTV3 Outer membrane protein, OMP85 family, putative; PFAM: surface antigen (D15); surface antigen variable number repeat protein.
  
 
   0.529
SMB99177.1
Surface antigen (D15); InterPro IPR000184; COGs: COG4775 Outer membrane protein/protective antigen OMA87; KEGG: sfu:Sfum_0758 surface antigen (D15); SPTR: A3I1U4 Putative uncharacterized protein; PFAM: surface antigen (D15).
  
 
   0.525
SMB93351.1
RagB/SusD domain protein; InterPro IPR012944; SPTR: A3XL35 Putative outer membrane protein probably involved in nutrient binding; PFAM: RagB/SusD domain protein.
  
    0.524
SMB86540.1
InterPro IPR005632; COGs: COG2825 Outer membrane protein; KEGG: gur:Gura_3236 outer membrane chaperone Skp (OmpH); SPTR: A3HY36 Cationic outer membrane protein OmpH; PFAM: outer membrane chaperone Skp (OmpH).
  
 
   0.517
SMB97296.1
RagB/SusD domain protein; InterPro IPR012944; KEGG: mxa:MXAN_4747 putative lipoprotein; SPTR: A4CMH2 Putative outer membrane protein, probably involved in nutrient binding; PFAM: RagB/SusD domain protein.
  
    0.515
SMB98216.1
Hypothetical protein; SPTR: A1ZEG6 Putative uncharacterized protein.
  
     0.510
SMB98217.1
KEGG: sfu:Sfum_4007 hypothetical protein; SPTR: A1ZEG7 Putative uncharacterized protein.
  
     0.496
Your Current Organism:
Hymenobacter roseosalivarius
NCBI taxonomy Id: 645990
Other names: H. roseosalivarius DSM 11622, Hymenobacter roseosalivarius AA-718, Hymenobacter roseosalivarius DSM 11622, Hymenobacter roseosalivarius str. DSM 11622, Hymenobacter roseosalivarius strain DSM 11622
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.