STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Sgly_0073KEGG: cce:Ccel_2780 hypothetical protein; SPTR: Putative uncharacterized protein. (87 aa)    
Predicted Functional Partners:
Sgly_0072
SpoVG family protein; COGs: COG2088 Uncharacterized protein involved in the regulation of septum location; InterPro IPR007170; KEGG: dsy:DSY0063 hypothetical protein; PFAM: Sporulation stage V, protein G; SPTR: Putative uncharacterized protein; PFAM: SpoVG; Belongs to the SpoVG family.
       0.683
Sgly_0071
S-layer domain-containing protein; InterPro IPR001119; KEGG: dsy:DSY0062 hypothetical protein; PFAM: S-layer homology domain; SPTR: Putative uncharacterized protein; PFAM: S-layer homology domain.
       0.675
Sgly_0074
KEGG: dsy:DSY0064 hypothetical protein; SPTR: Putative uncharacterized protein.
       0.638
Sgly_0075
KEGG: dsy:DSY0065 hypothetical protein; SPTR: Putative uncharacterized protein.
       0.530
Sgly_0076
D12 class N6 adenine-specific DNA methyltransferase; COGs: COG0338 Site-specific DNA methylase; InterPro IPR012327; KEGG: dsy:DSY0067 hypothetical protein; PFAM: D12 class N6 adenine-specific DNA methyltransferase; SPTR: Putative uncharacterized protein; PFAM: D12 class N6 adenine-specific DNA methyltransferase; TIGRFAM: DNA adenine methylase (dam).
       0.431
Sgly_0077
KEGG: dsy:DSY0068 hypothetical protein; SPTR: Putative uncharacterized protein.
       0.423
Your Current Organism:
Syntrophobotulus glycolicus
NCBI taxonomy Id: 645991
Other names: S. glycolicus DSM 8271, Syntrophobotulus glycolicus DSM 8271, Syntrophobotulus glycolicus str. DSM 8271, Syntrophobotulus glycolicus strain DSM 8271
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.