STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Sgly_0455KEGG: ssl:SS1G_10280 hypothetical protein; SPTR: Putative uncharacterized protein. (84 aa)    
Predicted Functional Partners:
Sgly_0456
Hypothetical protein; KEGG: ngr:NAEGRDRAFT_80798 C2 and zinc finger domain-containing protein; SPTR: Putative uncharacterized protein.
       0.605
Sgly_0454
Signal peptidase I; InterPro IPR019759: IPR000223; KEGG: cth:Cthe_2079 thylakoidal processing peptidase; PFAM: Peptidase S24/S26A/S26B, conserved region; SPTR: Thylakoidal processing peptidase. Serine peptidase. MEROPS family S26A; TIGRFAM: Peptidase S26A, signal peptidase I; PFAM: Peptidase S26; Peptidase S24-like; TIGRFAM: signal peptidase I, bacterial type.
       0.553
Sgly_0453
COGs: COG1832 CoA-binding protein; InterPro IPR003781; KEGG: tle:Tlet_0835 CoA-binding domain-containing protein; PFAM: CoA-binding; SPTR: CoA-binding domain protein; PFAM: CoA binding domain.
       0.400
Your Current Organism:
Syntrophobotulus glycolicus
NCBI taxonomy Id: 645991
Other names: S. glycolicus DSM 8271, Syntrophobotulus glycolicus DSM 8271, Syntrophobotulus glycolicus str. DSM 8271, Syntrophobotulus glycolicus strain DSM 8271
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.