STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Sgly_0621COGs: COG4786 Flagellar basal body rod protein; InterPro IPR001444: IPR010930: IPR020013; KEGG: ddf:DEFDS_2152 flagellar basal-body rod protein FlgG; PFAM: Flagellar basal body rod protein, N-terminal; Protein of unknown function DUF1078, C-terminal; SPTR: Flagellar basal-body rod protein FlgG; TIGRFAM: Fagellar hook-basal body protein, FlgE/F/G; PFAM: Domain of unknown function (DUF1078); Flagella basal body rod protein; TIGRFAM: fagellar hook-basal body proteins. (256 aa)    
Predicted Functional Partners:
Sgly_0623
COGs: COG4786 Flagellar basal body rod protein; InterPro IPR010930: IPR020013; KEGG: dsy:DSY2961 hypothetical protein; PFAM: Protein of unknown function DUF1078, C-terminal; SPTR: Putative uncharacterized protein; TIGRFAM: Fagellar hook-basal body protein, FlgE/F/G; PFAM: Domain of unknown function (DUF1078); TIGRFAM: fagellar hook-basal body proteins.
 
0.996
Sgly_0622
Flagellar basal-body rod protein FlgB; Structural component of flagellum, the bacterial motility apparatus. Part of the rod structure of flagellar basal body.
 
 
 0.994
Sgly_0603
COGs: COG1776 Chemotaxis protein CheC inhibitor of MCP methylation; InterPro IPR007597: IPR001543: IPR012826; KEGG: dhd:Dhaf_4142 CheC, inhibitor of MCP methylation / FliN fusion protein; PFAM: Surface presentation of antigen (SpoA); CheC-like protein; SPTR: CheC, inhibitor of MCP methylation / FliN fusion protein; TIGRFAM: Flagellar motor switch FliN; PFAM: Surface presentation of antigens (SPOA); CheC-like family; TIGRFAM: flagellar motor switch protein FliM; flagellar motor switch protein FliN.
 
  
 0.990
fliQ
Flagellar biosynthetic protein FliQ; Role in flagellar biosynthesis. Belongs to the FliQ/MopD/SpaQ family.
 
 
 0.984
Sgly_0593
COGs: COG1558 Flagellar basal body rod protein; InterPro IPR001444: IPR010930: IPR006299; KEGG: dhd:Dhaf_4152 flagellar basal-body rod protein FlgC; PFAM: Protein of unknown function DUF1078, C-terminal; Flagellar basal body rod protein, N-terminal; SPTR: Flagellar basal-body rod protein FlgC; TIGRFAM: Flagellar basal-body rod protein FlgC; PFAM: Domain of unknown function (DUF1078); Flagella basal body rod protein; TIGRFAM: flagellar basal-body rod protein FlgC; Belongs to the flagella basal body rod proteins family.
 
 
 0.983
Sgly_0595
Flagellar M-ring protein FliF; The M ring may be actively involved in energy transduction. Belongs to the FliF family.
 
 
 0.983
Sgly_0619
COGs: COG1843 Flagellar hook capping protein; InterPro IPR005648; KEGG: tjr:TherJR_1535 flagellar hook capping protein; PFAM: Flagellar hook capping protein; SPTR: Flagellar hook capping protein; PFAM: Flagellar hook capping protein.
 
 
 0.969
Sgly_0602
COGs: COG1868 Flagellar motor switch protein; InterPro IPR001689: IPR001543; KEGG: dhd:Dhaf_4143 flagellar motor switch protein FliM; PFAM: Flagellar motor switch protein FliM; Surface presentation of antigen (SpoA); SPTR: Flagellar motor switch protein FliM; TIGRFAM: Flagellar motor switch protein FliM; PFAM: Surface presentation of antigens (SPOA); Flagellar motor switch protein FliM; TIGRFAM: flagellar motor switch protein FliM.
 
  
 0.964
Sgly_0596
COGs: COG1536 Flagellar motor switch protein; InterPro IPR000090; KEGG: dhd:Dhaf_4149 flagellar motor switch protein G; PFAM: Flagellar motor switch protein FliG; SPTR: Flagellar motor switch protein FliG; TIGRFAM: Flagellar motor switch protein FliG; PFAM: FliG C-terminal domain; TIGRFAM: flagellar motor switch protein FliG.
 
  
 0.963
fliP
Flagellar biosynthetic protein FliP; Plays a role in the flagellum-specific transport system. Belongs to the FliP/MopC/SpaP family.
 
 
 0.957
Your Current Organism:
Syntrophobotulus glycolicus
NCBI taxonomy Id: 645991
Other names: S. glycolicus DSM 8271, Syntrophobotulus glycolicus DSM 8271, Syntrophobotulus glycolicus str. DSM 8271, Syntrophobotulus glycolicus strain DSM 8271
Server load: low (14%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.