STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Sgly_0780Hypothetical protein; KEGG: cfa:478563 solute carrier family 9, member 10; SPTR: Inositolphosphorylceramide synthase. (75 aa)    
Predicted Functional Partners:
Sgly_0781
Phage tail tape measure protein, TP901 family; InterPro IPR010090; KEGG: lmy:LM5923_1317 hypothetical protein; PFAM: Phage tail tape measure protein TP901, core region; SPTR: Putative uncharacterized protein; TIGRFAM: Phage tail tape measure protein TP901, core region; PFAM: Phage-related minor tail protein; TIGRFAM: phage tail tape measure protein, TP901 family, core region.
       0.554
Sgly_0782
Peptidoglycan-binding lysin domain protein; InterPro IPR002482: IPR018392; KEGG: dhd:Dhaf_1417 peptidoglycan-binding LysM; PFAM: Peptidoglycan-binding lysin domain; SMART: Peptidoglycan-binding Lysin subgroup; SPTR: Putative uncharacterized protein; PFAM: LysM domain.
       0.507
Sgly_0783
KEGG: bgl:bglu_1g20340 hypothetical protein; SPTR: Putative uncharacterized protein; PFAM: Phage late control gene D protein (GPD).
       0.494
Sgly_0784
KEGG: cbt:CLH_1713 putative phage baseplate assembly protein V; SPTR: Putative phage baseplate assembly protein V; PFAM: Phage-related baseplate assembly protein.
       0.451
Sgly_0785
GPW/gp25 family protein; InterPro IPR007048; KEGG: mpd:MCP_0320 hypothetical protein; PFAM: GPW/gp25; SPTR: Gp14.1; PFAM: Gene 25-like lysozyme.
       0.441
Sgly_0786
Baseplate J family protein; COGs: COG3299 Uncharacterized homolog of phage Mu protein gp47; InterPro IPR006949; KEGG: gym:GYMC10_5392 baseplate J family protein; PFAM: Baseplate assembly protein J-like, predicted; SPTR: Baseplate J family protein; PFAM: Baseplate J-like protein.
       0.441
Sgly_0787
KEGG: gym:GYMC10_5391 hypothetical protein; SPTR: Putative uncharacterized protein; PFAM: Uncharacterized protein conserved in bacteria (DUF2313).
       0.441
Sgly_0788
Hypothetical protein; KEGG: afl:Aflv_0675 phage-related putative tail protein; SPTR: Phage-related putative tail protein.
       0.423
Sgly_0789
Hypothetical protein; KEGG: sec:SC0572 phosphoribosylaminoimidazole carboxylase ATPase subunit; SPTR: Phosphoribosylaminoimidazole carboxylase AIR carboxylase, CO(2)-fixing subunit.
       0.423
Sgly_0790
KEGG: ppe:PEPE_0804 hypothetical protein; SPTR: Phage uncharacterised protein (Phage_XkdX); PFAM: Phage uncharacterised protein (Phage_XkdX); TIGRFAM: phage uncharacterized protein, XkdX family.
       0.423
Your Current Organism:
Syntrophobotulus glycolicus
NCBI taxonomy Id: 645991
Other names: S. glycolicus DSM 8271, Syntrophobotulus glycolicus DSM 8271, Syntrophobotulus glycolicus str. DSM 8271, Syntrophobotulus glycolicus strain DSM 8271
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.