STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Sgly_1405Sulfate-transporting ATPase; COGs: COG1131 ABC-type multidrug transport system ATPase component; InterPro IPR003439: IPR003593; KEGG: dhd:Dhaf_3238 ABC transporter related; PFAM: ABC transporter-like; PRIAM: Sulfate-transporting ATPase; SMART: ATPase, AAA+ type, core; SPTR: Putative uncharacterized protein; PFAM: ABC transporter. (304 aa)    
Predicted Functional Partners:
Sgly_1404
ABC-2 type transporter; InterPro IPR013525; KEGG: dhd:Dhaf_3239 ABC-2 type transporter; PFAM: ABC-2 type transporter; SPTR: Putative uncharacterized protein; PFAM: ABC-2 type transporter.
    0.960
Sgly_0145
ABC-2 type transporter; COGs: COG0842 ABC-type multidrug transport system permease component; InterPro IPR013525; KEGG: slp:Slip_0730 ABC-2 type transporter; PFAM: ABC-2 type transporter; SPTR: ABC-2 type transporter; PFAM: ABC-2 type transporter; TIGRFAM: ABC transporter efflux protein, DrrB family.
    0.935
Sgly_2555
Oligopeptide/dipeptide ABC transporter, ATPase subunit; COGs: COG0444 ABC-type dipeptide/oligopeptide/nickel transport system ATPase component; InterPro IPR003593: IPR003439: IPR013563: IPR010066; KEGG: toc:Toce_0617 oligopeptide/dipeptide ABC transporter, ATPase subunit; PFAM: ABC transporter-like; Oligopeptide/dipeptide ABC transporter, C-terminal; PRIAM: Nickel-transporting ATPase; SMART: ATPase, AAA+ type, core; SPTR: Oligopeptide/dipeptide ABC transporter, ATPase subunit; TIGRFAM: Oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal; PFAM: ABC transporter; Oligo [...]
 
     
0.884
Sgly_1817
Nickel-transporting ATPase; COGs: COG0444 ABC-type dipeptide/oligopeptide/nickel transport system ATPase component; InterPro IPR003439: IPR013563: IPR003593; KEGG: bld:BLi02814 hypothetical protein; PFAM: ABC transporter-like; Oligopeptide/dipeptide ABC transporter, C-terminal; PRIAM: Nickel-transporting ATPase; SMART: ATPase, AAA+ type, core; SPTR: Dipeptide ABC transporter (ATP-binding protein); manually curated; PFAM: ABC transporter.
 
     
0.800
Sgly_3056
COGs: COG1132 ABC-type multidrug transport system ATPase and permease components; InterPro IPR001140: IPR003439: IPR003593; KEGG: cbe:Cbei_2094 ABC transporter, transmembrane region; PFAM: ABC transporter, transmembrane domain; ABC transporter-like; PRIAM: Xenobiotic-transporting ATPase; SMART: ATPase, AAA+ type, core; SPTR: ABC transporter, transmembrane region; PFAM: ABC transporter transmembrane region; ABC transporter.
 
 
 
0.800
Sgly_1808
ABC transporter related protein; COGs: COG1131 ABC-type multidrug transport system ATPase component; InterPro IPR003439: IPR003593; KEGG: cbf:CLI_0638 ABC transporter, ATP-binding protein; PFAM: ABC transporter-like; SMART: ATPase, AAA+ type, core; SPTR: ABC transporter related; PFAM: ABC transporter.
 
   
0.795
Sgly_2130
Nickel-transporting ATPase; COGs: COG0444 ABC-type dipeptide/oligopeptide/nickel transport system ATPase component; InterPro IPR003593: IPR003439; KEGG: apr:Apre_1769 ABC transporter related; PFAM: ABC transporter-like; PRIAM: Nickel-transporting ATPase; SMART: ATPase, AAA+ type, core; SPTR: Putative uncharacterized protein; PFAM: ABC transporter.
 
     
0.770
Sgly_2925
KEGG: dhd:Dhaf_2921 membrane spanning protein; SPTR: Putative uncharacterized protein.
  
 
 0.640
Sgly_2798
COGs: COG1132 ABC-type multidrug transport system ATPase and permease components; InterPro IPR003593: IPR003439; KEGG: shi:Shel_25700 ABC-type multidrug transport system, ATPase and permease component; PFAM: ABC transporter-like; PRIAM: Xenobiotic-transporting ATPase; SMART: ATPase, AAA+ type, core; SPTR: ABC-type multidrug transport system, ATPase and permease components; PFAM: ABC transporter transmembrane region; ABC transporter.
 
 
 
0.630
Sgly_3103
Oligopeptide/dipeptide ABC transporter, ATPase subunit; COGs: COG0444 ABC-type dipeptide/oligopeptide/nickel transport system ATPase component; InterPro IPR003439: IPR013563: IPR003593: IPR010066; KEGG: dhd:Dhaf_1863 oligopeptide/dipeptide ABC transporter, ATPase subunit; PFAM: ABC transporter-like; Oligopeptide/dipeptide ABC transporter, C-terminal; SMART: ATPase, AAA+ type, core; SPTR: Oligopeptide/dipeptide ABC transporter, ATPase subunit; TIGRFAM: Oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal; PFAM: ABC transporter; Oligopeptide/dipeptide transporter, C-te [...]
 
    
0.559
Your Current Organism:
Syntrophobotulus glycolicus
NCBI taxonomy Id: 645991
Other names: S. glycolicus DSM 8271, Syntrophobotulus glycolicus DSM 8271, Syntrophobotulus glycolicus str. DSM 8271, Syntrophobotulus glycolicus strain DSM 8271
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