STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEH06008.1PFAM: Queuosine synthesis-like; KEGG: mae:Maeo_0037 ExsB family protein. (256 aa)    
Predicted Functional Partners:
AEH06717.1
TIGRFAM: Pyridoxal phosphate-dependent transferase, archaea; KEGG: mae:Maeo_1169 L-seryl-tRNA selenium transferase.
  
     0.702
AEH06615.1
PhoU family protein; PFAM: PhoU; KEGG: mae:Maeo_0990 phosphate uptake regulator, PhoU.
 
     0.671
AEH07029.1
KEGG: mae:Maeo_0375 CBS domain-containing protein; PFAM: Cystathionine beta-synthase, core; SMART: Cystathionine beta-synthase, core.
  
     0.586
AEH06682.1
PFAM: CobB/CobQ-like glutamine amidotransferase; KEGG: mae:Maeo_1143 cobyrinic acid a,c-diamide synthase.
  
     0.567
cbiD
cobalt-precorrin-6A synthase (deacetylating); Catalyzes the methylation of C-1 in cobalt-precorrin-5B to form cobalt-precorrin-6A.
 
     0.546
AEH07432.1
Protein of unknown function DUF129; PFAM: F420-0:gamma-glutamyl ligase-related; KEGG: mae:Maeo_0771 hypothetical protein.
 
     0.540
AEH06768.1
PFAM: Oligosaccharyl transferase, STT3 subunit; KEGG: mae:Maeo_1409 oligosaccharyl transferase STT3 subunit.
  
     0.530
AEH07349.1
PFAM: Citrate lyase ligase, C-terminal; KEGG: mfe:Mefer_0840 protein of unknown function DUF795.
  
     0.521
rpl34e
KEGG: mae:Maeo_1128 50S ribosomal protein L34e; HAMAP: 50S ribosomal protein L34e; PFAM: Ribosomal protein L34e; Belongs to the eukaryotic ribosomal protein eL34 family.
  
     0.499
pgk2
KEGG: mae:Maeo_0251 2-phosphoglycerate kinase; HAMAP: 2-phosphoglycerate kinase; PFAM: ATP-cone.
  
     0.497
Your Current Organism:
Methanothermococcus okinawensis
NCBI taxonomy Id: 647113
Other names: M. okinawensis IH1, Methanothermococcus okinawensis DSM 14208, Methanothermococcus okinawensis IH1, Methanothermococcus okinawensis str. IH1, Methanothermococcus okinawensis strain IH1
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