STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Lbys_1844InterPro IPR005829; KEGG: fjo:Fjoh_1409 major facilitator transporter; SPTR: Major facilitator transporter; PFAM: Sugar (and other) transporter. (487 aa)    
Predicted Functional Partners:
Lbys_1843
KEGG: fba:FIC_01011 hypothetical protein; SPTR: Putative uncharacterized protein.
       0.774
Lbys_1841
COGs: COG1301 Na+/H+-dicarboxylate symporter; InterPro IPR001991:IPR018107; KEGG: dfe:Dfer_3533 sodium:dicarboxylate symporter; PFAM: sodium:dicarboxylate symporter; SPTR: Sodium:dicarboxylate symporter; PFAM: Sodium:dicarboxylate symporter family; Belongs to the dicarboxylate/amino acid:cation symporter (DAACS) (TC 2.A.23) family.
 
   
 0.742
Lbys_1842
COGs: COG1760 L-serine deaminase; InterPro IPR005131:IPR005130:IPR004644; KEGG: gvi:glr2358 L-serine dehydratase; PFAM: serine dehydratase alpha chain; serine dehydratase beta chain; PRIAM: L-serine ammonia-lyase; SPTR: L-serine dehydratase; TIGRFAM: L-serine dehydratase 1; PFAM: Serine dehydratase alpha chain; Serine dehydratase beta chain; TIGRFAM: L-serine dehydratase, iron-sulfur-dependent, single chain form.
  
  
 0.739
Lbys_1839
InterPro IPR000866:IPR017936; KEGG: chu:CHU_1976 thiol-disulfide isomerase or thioredoxin; PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; SPTR: Thiol-disulfide isomerase or thioredoxin; PFAM: AhpC/TSA family.
       0.653
Lbys_1840
InterPro IPR000866:IPR017937:IPR017936; KEGG: chu:CHU_1975 thioredoxin-like protein; PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; SPTR: Thioredoxin-like protein; PFAM: AhpC/TSA family.
       0.653
Lbys_1845
COGs: COG2270 Permease of the major facilitator superfamily; InterPro IPR011701; KEGG: sli:Slin_2251 major facilitator superfamily MFS_1; PFAM: major facilitator superfamily MFS_1; SPTR: Major facilitator superfamily MFS_1; PFAM: Vacuole effluxer Atg22 like.
     
 0.525
Lbys_1846
InterPro IPR001296; KEGG: sli:Slin_6404 glycosyl transferase group 1; PFAM: glycosyl transferase group 1; SPTR: Glycosyl transferase group 1; PFAM: Glycosyl transferases group 1.
       0.515
Lbys_1838
Protein of unknown function DUF2089; COGs: COG3877 conserved hypothetical protein; InterPro IPR018658; KEGG: fps:FP0913 hypothetical protein; PFAM: Protein of unknown function DUF2089; SPTR: Putative uncharacterized protein; PFAM: Protein of unknown function(DUF2089).
       0.429
Lbys_1836
Alpha/beta hydrolase fold protein; InterPro IPR000073; KEGG: zpr:ZPR_1491 protein containing alpha/beta hydrolase fold; PFAM: alpha/beta hydrolase fold; SPTR: Putative uncharacterized protein; PFAM: alpha/beta hydrolase fold.
       0.423
Lbys_1837
KEGG: fps:FP0912 hypothetical protein; SPTR: Putative uncharacterized protein.
       0.423
Your Current Organism:
Leadbetterella byssophila
NCBI taxonomy Id: 649349
Other names: L. byssophila DSM 17132, Leadbetterella byssophila 4M15, Leadbetterella byssophila DSM 17132, Leadbetterella byssophila str. DSM 17132, Leadbetterella byssophila strain DSM 17132
Server load: low (28%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.