STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Lbys_3447KEGG: cja:CJA_2037 hypothetical protein; SPTR: Putative uncharacterized protein. (200 aa)    
Predicted Functional Partners:
Lbys_3448
KEGG: bpo:BP951000_0760 hypothetical protein; SPTR: Putative uncharacterized protein FNV0213.
       0.773
Lbys_0668
NUDIX hydrolase; InterPro IPR000086; KEGG: dfe:Dfer_1953 NUDIX hydrolase; PFAM: NUDIX hydrolase; SPTR: NUDIX hydrolase; PFAM: NUDIX domain.
  
     0.720
Lbys_0654
KEGG: dfe:Dfer_2763 hypothetical protein; SPTR: Putative uncharacterized protein; PFAM: DinB family.
  
     0.696
Lbys_1706
InterPro IPR005181; KEGG: sli:Slin_5096 hypothetical protein; PFAM: protein of unknown function DUF303 acetylesterase; SPTR: Putative uncharacterized protein; PFAM: Domain of unknown function (DUF303).
  
     0.662
Lbys_1565
KEGG: sli:Slin_5033 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.656
Lbys_0655
KEGG: sli:Slin_2223 hypothetical protein; SPTR: Putative uncharacterized protein; PFAM: DinB family.
  
     0.623
Lbys_1514
KEGG: gfo:GFO_0237 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.601
Lbys_0064
InterPro IPR002123; KEGG: dfe:Dfer_4159 phospholipid/glycerol acyltransferase; PFAM: phospholipid/glycerol acyltransferase; SMART: phospholipid/glycerol acyltransferase; SPTR: Phospholipid/glycerol acyltransferase; PFAM: Acyltransferase.
  
     0.593
Lbys_1712
KEGG: sli:Slin_1460 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.586
Lbys_3165
COGs: COG0204 1-acyl-sn-glycerol-3-phosphate acyltransferase; InterPro IPR002123; KEGG: sli:Slin_4584 phospholipid/glycerol acyltransferase; PFAM: phospholipid/glycerol acyltransferase; SMART: phospholipid/glycerol acyltransferase; SPTR: Phospholipid/glycerol acyltransferase; PFAM: Acyltransferase; TIGRFAM: 1-acyl-sn-glycerol-3-phosphate acyltransferases.
  
     0.582
Your Current Organism:
Leadbetterella byssophila
NCBI taxonomy Id: 649349
Other names: L. byssophila DSM 17132, Leadbetterella byssophila 4M15, Leadbetterella byssophila DSM 17132, Leadbetterella byssophila str. DSM 17132, Leadbetterella byssophila strain DSM 17132
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