STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Trad_1017KEGG: ilo:IL0698 hypothetical protein; SPTR: Q5R0F1 Uncharacterized conserved protein. (85 aa)    
Predicted Functional Partners:
Trad_1018
COGs: COG1966 Carbon starvation protein predicted membrane protein; InterPro IPR003706; KEGG: abo:ABO_1303 carbon starvation protein CstA; PFAM: carbon starvation protein CstA; SPTR: Q0VPZ7 Carbon starvation protein CstA; PFAM: Carbon starvation protein CstA.
 
     0.951
Trad_1016
Arsenite-activated ATPase ArsA; COGs: COG0003 ATPase involved in chromosome partitioning; InterPro IPR003593:IPR003348; KEGG: abo:ABO_1301 putative arsenical pump-driving ATPase; PFAM: Anion-transporting ATPase; PRIAM: Arsenite-transporting ATPase; SMART: AAA ATPase; SPTR: Q0VPZ9 Putative arsenical pump-driving ATPase; TIGRFAM: arsenite-activated ATPase ArsA; PFAM: Anion-transporting ATPase; TIGRFAM: arsenite-activated ATPase (arsA).
 
     0.948
Your Current Organism:
Truepera radiovictrix
NCBI taxonomy Id: 649638
Other names: T. radiovictrix DSM 17093, Truepera radiovictrix DSM 17093, Truepera radiovictrix RQ-24, Truepera radiovictrix str. DSM 17093, Truepera radiovictrix strain DSM 17093
Server load: low (28%) [HD]