Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 annotation | node2 annotation | score |
Trad_1016 | Trad_1017 | Arsenite-activated ATPase ArsA; COGs: COG0003 ATPase involved in chromosome partitioning; InterPro IPR003593:IPR003348; KEGG: abo:ABO_1301 putative arsenical pump-driving ATPase; PFAM: Anion-transporting ATPase; PRIAM: Arsenite-transporting ATPase; SMART: AAA ATPase; SPTR: Q0VPZ9 Putative arsenical pump-driving ATPase; TIGRFAM: arsenite-activated ATPase ArsA; PFAM: Anion-transporting ATPase; TIGRFAM: arsenite-activated ATPase (arsA). | KEGG: ilo:IL0698 hypothetical protein; SPTR: Q5R0F1 Uncharacterized conserved protein. | 0.948 |
Trad_1016 | Trad_1018 | Arsenite-activated ATPase ArsA; COGs: COG0003 ATPase involved in chromosome partitioning; InterPro IPR003593:IPR003348; KEGG: abo:ABO_1301 putative arsenical pump-driving ATPase; PFAM: Anion-transporting ATPase; PRIAM: Arsenite-transporting ATPase; SMART: AAA ATPase; SPTR: Q0VPZ9 Putative arsenical pump-driving ATPase; TIGRFAM: arsenite-activated ATPase ArsA; PFAM: Anion-transporting ATPase; TIGRFAM: arsenite-activated ATPase (arsA). | COGs: COG1966 Carbon starvation protein predicted membrane protein; InterPro IPR003706; KEGG: abo:ABO_1303 carbon starvation protein CstA; PFAM: carbon starvation protein CstA; SPTR: Q0VPZ7 Carbon starvation protein CstA; PFAM: Carbon starvation protein CstA. | 0.954 |
Trad_1017 | Trad_1016 | KEGG: ilo:IL0698 hypothetical protein; SPTR: Q5R0F1 Uncharacterized conserved protein. | Arsenite-activated ATPase ArsA; COGs: COG0003 ATPase involved in chromosome partitioning; InterPro IPR003593:IPR003348; KEGG: abo:ABO_1301 putative arsenical pump-driving ATPase; PFAM: Anion-transporting ATPase; PRIAM: Arsenite-transporting ATPase; SMART: AAA ATPase; SPTR: Q0VPZ9 Putative arsenical pump-driving ATPase; TIGRFAM: arsenite-activated ATPase ArsA; PFAM: Anion-transporting ATPase; TIGRFAM: arsenite-activated ATPase (arsA). | 0.948 |
Trad_1017 | Trad_1018 | KEGG: ilo:IL0698 hypothetical protein; SPTR: Q5R0F1 Uncharacterized conserved protein. | COGs: COG1966 Carbon starvation protein predicted membrane protein; InterPro IPR003706; KEGG: abo:ABO_1303 carbon starvation protein CstA; PFAM: carbon starvation protein CstA; SPTR: Q0VPZ7 Carbon starvation protein CstA; PFAM: Carbon starvation protein CstA. | 0.951 |
Trad_1018 | Trad_1016 | COGs: COG1966 Carbon starvation protein predicted membrane protein; InterPro IPR003706; KEGG: abo:ABO_1303 carbon starvation protein CstA; PFAM: carbon starvation protein CstA; SPTR: Q0VPZ7 Carbon starvation protein CstA; PFAM: Carbon starvation protein CstA. | Arsenite-activated ATPase ArsA; COGs: COG0003 ATPase involved in chromosome partitioning; InterPro IPR003593:IPR003348; KEGG: abo:ABO_1301 putative arsenical pump-driving ATPase; PFAM: Anion-transporting ATPase; PRIAM: Arsenite-transporting ATPase; SMART: AAA ATPase; SPTR: Q0VPZ9 Putative arsenical pump-driving ATPase; TIGRFAM: arsenite-activated ATPase ArsA; PFAM: Anion-transporting ATPase; TIGRFAM: arsenite-activated ATPase (arsA). | 0.954 |
Trad_1018 | Trad_1017 | COGs: COG1966 Carbon starvation protein predicted membrane protein; InterPro IPR003706; KEGG: abo:ABO_1303 carbon starvation protein CstA; PFAM: carbon starvation protein CstA; SPTR: Q0VPZ7 Carbon starvation protein CstA; PFAM: Carbon starvation protein CstA. | KEGG: ilo:IL0698 hypothetical protein; SPTR: Q5R0F1 Uncharacterized conserved protein. | 0.951 |