node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Trad_0726 | Trad_1500 | Trad_0726 | Trad_1500 | Catalase; COGs: COG3546 Mn-containing catalase; InterPro IPR007760:IPR012347:IPR009078; KEGG: dfe:Dfer_1680 catalase; PFAM: manganese containing catalase; PRIAM: Catalase; SPTR: C4D0C0 Mn-containing catalase; PFAM: Manganese containing catalase. | COGs: COG0605 Superoxide dismutase; InterProIPR019833:IPR017909:IPR019831:IPR019832:IPR 001189; KEGG: rmr:Rmar_0920 superoxide dismutase; PFAM: Manganese/iron superoxide dismutase-like; PRIAM: Superoxide dismutase; SPTR: D0MH29 Superoxide dismutase; PFAM: Iron/manganese superoxide dismutases, alpha-hairpin domain; Iron/manganese superoxide dismutases, C-terminal domain. | 0.646 |
Trad_1500 | Trad_0726 | Trad_1500 | Trad_0726 | COGs: COG0605 Superoxide dismutase; InterProIPR019833:IPR017909:IPR019831:IPR019832:IPR 001189; KEGG: rmr:Rmar_0920 superoxide dismutase; PFAM: Manganese/iron superoxide dismutase-like; PRIAM: Superoxide dismutase; SPTR: D0MH29 Superoxide dismutase; PFAM: Iron/manganese superoxide dismutases, alpha-hairpin domain; Iron/manganese superoxide dismutases, C-terminal domain. | Catalase; COGs: COG3546 Mn-containing catalase; InterPro IPR007760:IPR012347:IPR009078; KEGG: dfe:Dfer_1680 catalase; PFAM: manganese containing catalase; PRIAM: Catalase; SPTR: C4D0C0 Mn-containing catalase; PFAM: Manganese containing catalase. | 0.646 |
Trad_1500 | Trad_1501 | Trad_1500 | Trad_1501 | COGs: COG0605 Superoxide dismutase; InterProIPR019833:IPR017909:IPR019831:IPR019832:IPR 001189; KEGG: rmr:Rmar_0920 superoxide dismutase; PFAM: Manganese/iron superoxide dismutase-like; PRIAM: Superoxide dismutase; SPTR: D0MH29 Superoxide dismutase; PFAM: Iron/manganese superoxide dismutases, alpha-hairpin domain; Iron/manganese superoxide dismutases, C-terminal domain. | Rhodanese domain protein; InterPro IPR001763; KEGG: ttj:TTHA0839 phage shock protein E; SMART: Rhodanese domain protein; SPTR: C1XNW5 Rhodanese-related sulfurtransferase; PFAM: Rhodanese-like domain. | 0.867 |
Trad_1500 | rplC | Trad_1500 | Trad_1038 | COGs: COG0605 Superoxide dismutase; InterProIPR019833:IPR017909:IPR019831:IPR019832:IPR 001189; KEGG: rmr:Rmar_0920 superoxide dismutase; PFAM: Manganese/iron superoxide dismutase-like; PRIAM: Superoxide dismutase; SPTR: D0MH29 Superoxide dismutase; PFAM: Iron/manganese superoxide dismutases, alpha-hairpin domain; Iron/manganese superoxide dismutases, C-terminal domain. | 50S ribosomal protein L3; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit; Belongs to the universal ribosomal protein uL3 family. | 0.675 |
Trad_1500 | rplM | Trad_1500 | Trad_1287 | COGs: COG0605 Superoxide dismutase; InterProIPR019833:IPR017909:IPR019831:IPR019832:IPR 001189; KEGG: rmr:Rmar_0920 superoxide dismutase; PFAM: Manganese/iron superoxide dismutase-like; PRIAM: Superoxide dismutase; SPTR: D0MH29 Superoxide dismutase; PFAM: Iron/manganese superoxide dismutases, alpha-hairpin domain; Iron/manganese superoxide dismutases, C-terminal domain. | Ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly. | 0.688 |
Trad_1500 | rplN | Trad_1500 | Trad_1048 | COGs: COG0605 Superoxide dismutase; InterProIPR019833:IPR017909:IPR019831:IPR019832:IPR 001189; KEGG: rmr:Rmar_0920 superoxide dismutase; PFAM: Manganese/iron superoxide dismutase-like; PRIAM: Superoxide dismutase; SPTR: D0MH29 Superoxide dismutase; PFAM: Iron/manganese superoxide dismutases, alpha-hairpin domain; Iron/manganese superoxide dismutases, C-terminal domain. | Ribosomal protein L14; Binds to 23S rRNA. Forms part of two intersubunit bridges in the 70S ribosome; Belongs to the universal ribosomal protein uL14 family. | 0.634 |
Trad_1500 | rplO | Trad_1500 | Trad_1057 | COGs: COG0605 Superoxide dismutase; InterProIPR019833:IPR017909:IPR019831:IPR019832:IPR 001189; KEGG: rmr:Rmar_0920 superoxide dismutase; PFAM: Manganese/iron superoxide dismutase-like; PRIAM: Superoxide dismutase; SPTR: D0MH29 Superoxide dismutase; PFAM: Iron/manganese superoxide dismutases, alpha-hairpin domain; Iron/manganese superoxide dismutases, C-terminal domain. | Ribosomal protein L15; Binds to the 23S rRNA; Belongs to the universal ribosomal protein uL15 family. | 0.682 |
Trad_1500 | rplQ | Trad_1500 | Trad_1067 | COGs: COG0605 Superoxide dismutase; InterProIPR019833:IPR017909:IPR019831:IPR019832:IPR 001189; KEGG: rmr:Rmar_0920 superoxide dismutase; PFAM: Manganese/iron superoxide dismutase-like; PRIAM: Superoxide dismutase; SPTR: D0MH29 Superoxide dismutase; PFAM: Iron/manganese superoxide dismutases, alpha-hairpin domain; Iron/manganese superoxide dismutases, C-terminal domain. | COGs: COG0203 Ribosomal protein L17; InterPro IPR000456; KEGG: ddr:Deide_18620 putative 50S ribosomal protein L17; PFAM: ribosomal protein L17; SPTR: C1CXD3 50S ribosomal protein L17; TIGRFAM: ribosomal protein L17; PFAM: Ribosomal protein L17; TIGRFAM: ribosomal protein L17. | 0.696 |
Trad_1500 | rpsQ | Trad_1500 | Trad_1047 | COGs: COG0605 Superoxide dismutase; InterProIPR019833:IPR017909:IPR019831:IPR019832:IPR 001189; KEGG: rmr:Rmar_0920 superoxide dismutase; PFAM: Manganese/iron superoxide dismutase-like; PRIAM: Superoxide dismutase; SPTR: D0MH29 Superoxide dismutase; PFAM: Iron/manganese superoxide dismutases, alpha-hairpin domain; Iron/manganese superoxide dismutases, C-terminal domain. | 30S ribosomal protein S17; One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA. | 0.666 |
Trad_1500 | sucD | Trad_1500 | Trad_1258 | COGs: COG0605 Superoxide dismutase; InterProIPR019833:IPR017909:IPR019831:IPR019832:IPR 001189; KEGG: rmr:Rmar_0920 superoxide dismutase; PFAM: Manganese/iron superoxide dismutase-like; PRIAM: Superoxide dismutase; SPTR: D0MH29 Superoxide dismutase; PFAM: Iron/manganese superoxide dismutases, alpha-hairpin domain; Iron/manganese superoxide dismutases, C-terminal domain. | succinyl-CoA synthetase, alpha subunit; Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and nucleotide specificity is provided by the beta subunit. | 0.659 |
Trad_1500 | ybeY | Trad_1500 | Trad_0443 | COGs: COG0605 Superoxide dismutase; InterProIPR019833:IPR017909:IPR019831:IPR019832:IPR 001189; KEGG: rmr:Rmar_0920 superoxide dismutase; PFAM: Manganese/iron superoxide dismutase-like; PRIAM: Superoxide dismutase; SPTR: D0MH29 Superoxide dismutase; PFAM: Iron/manganese superoxide dismutases, alpha-hairpin domain; Iron/manganese superoxide dismutases, C-terminal domain. | Protein of unknown function UPF0054; Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA. | 0.662 |
Trad_1501 | Trad_1500 | Trad_1501 | Trad_1500 | Rhodanese domain protein; InterPro IPR001763; KEGG: ttj:TTHA0839 phage shock protein E; SMART: Rhodanese domain protein; SPTR: C1XNW5 Rhodanese-related sulfurtransferase; PFAM: Rhodanese-like domain. | COGs: COG0605 Superoxide dismutase; InterProIPR019833:IPR017909:IPR019831:IPR019832:IPR 001189; KEGG: rmr:Rmar_0920 superoxide dismutase; PFAM: Manganese/iron superoxide dismutase-like; PRIAM: Superoxide dismutase; SPTR: D0MH29 Superoxide dismutase; PFAM: Iron/manganese superoxide dismutases, alpha-hairpin domain; Iron/manganese superoxide dismutases, C-terminal domain. | 0.867 |
Trad_1501 | rplC | Trad_1501 | Trad_1038 | Rhodanese domain protein; InterPro IPR001763; KEGG: ttj:TTHA0839 phage shock protein E; SMART: Rhodanese domain protein; SPTR: C1XNW5 Rhodanese-related sulfurtransferase; PFAM: Rhodanese-like domain. | 50S ribosomal protein L3; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit; Belongs to the universal ribosomal protein uL3 family. | 0.446 |
Trad_1501 | rplM | Trad_1501 | Trad_1287 | Rhodanese domain protein; InterPro IPR001763; KEGG: ttj:TTHA0839 phage shock protein E; SMART: Rhodanese domain protein; SPTR: C1XNW5 Rhodanese-related sulfurtransferase; PFAM: Rhodanese-like domain. | Ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly. | 0.460 |
Trad_1501 | rplO | Trad_1501 | Trad_1057 | Rhodanese domain protein; InterPro IPR001763; KEGG: ttj:TTHA0839 phage shock protein E; SMART: Rhodanese domain protein; SPTR: C1XNW5 Rhodanese-related sulfurtransferase; PFAM: Rhodanese-like domain. | Ribosomal protein L15; Binds to the 23S rRNA; Belongs to the universal ribosomal protein uL15 family. | 0.442 |
Trad_1501 | rplQ | Trad_1501 | Trad_1067 | Rhodanese domain protein; InterPro IPR001763; KEGG: ttj:TTHA0839 phage shock protein E; SMART: Rhodanese domain protein; SPTR: C1XNW5 Rhodanese-related sulfurtransferase; PFAM: Rhodanese-like domain. | COGs: COG0203 Ribosomal protein L17; InterPro IPR000456; KEGG: ddr:Deide_18620 putative 50S ribosomal protein L17; PFAM: ribosomal protein L17; SPTR: C1CXD3 50S ribosomal protein L17; TIGRFAM: ribosomal protein L17; PFAM: Ribosomal protein L17; TIGRFAM: ribosomal protein L17. | 0.500 |
Trad_1501 | rpsQ | Trad_1501 | Trad_1047 | Rhodanese domain protein; InterPro IPR001763; KEGG: ttj:TTHA0839 phage shock protein E; SMART: Rhodanese domain protein; SPTR: C1XNW5 Rhodanese-related sulfurtransferase; PFAM: Rhodanese-like domain. | 30S ribosomal protein S17; One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA. | 0.521 |
Trad_1501 | ybeY | Trad_1501 | Trad_0443 | Rhodanese domain protein; InterPro IPR001763; KEGG: ttj:TTHA0839 phage shock protein E; SMART: Rhodanese domain protein; SPTR: C1XNW5 Rhodanese-related sulfurtransferase; PFAM: Rhodanese-like domain. | Protein of unknown function UPF0054; Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA. | 0.560 |
rplC | Trad_1500 | Trad_1038 | Trad_1500 | 50S ribosomal protein L3; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit; Belongs to the universal ribosomal protein uL3 family. | COGs: COG0605 Superoxide dismutase; InterProIPR019833:IPR017909:IPR019831:IPR019832:IPR 001189; KEGG: rmr:Rmar_0920 superoxide dismutase; PFAM: Manganese/iron superoxide dismutase-like; PRIAM: Superoxide dismutase; SPTR: D0MH29 Superoxide dismutase; PFAM: Iron/manganese superoxide dismutases, alpha-hairpin domain; Iron/manganese superoxide dismutases, C-terminal domain. | 0.675 |
rplC | Trad_1501 | Trad_1038 | Trad_1501 | 50S ribosomal protein L3; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit; Belongs to the universal ribosomal protein uL3 family. | Rhodanese domain protein; InterPro IPR001763; KEGG: ttj:TTHA0839 phage shock protein E; SMART: Rhodanese domain protein; SPTR: C1XNW5 Rhodanese-related sulfurtransferase; PFAM: Rhodanese-like domain. | 0.446 |