STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Trad_2029NUDIX hydrolase; InterPro IPR015797:IPR000086:IPR020476:IPR020084; KEGG: acp:A2cp1_4264 NUDIX hydrolase; PFAM: NUDIX hydrolase; SPTR: B8JAT2 NUDIX hydrolase; PFAM: NUDIX domain; Belongs to the Nudix hydrolase family. (213 aa)    
Predicted Functional Partners:
Trad_2030
MazG family protein; COGs: COG3956 Protein containing tetrapyrrole methyltransferase domain and MazG-like (predicted pyrophosphatase) domain; InterPro IPR011551:IPR004518; KEGG: dge:Dgeo_0816 nucleoside triphosphate pyrophosphohydrolase; PFAM: MazG nucleotide pyrophosphohydrolase; SPTR: Q1J066 MazG family protein; TIGRFAM: MazG family protein; PFAM: MazG nucleotide pyrophosphohydrolase domain; TIGRFAM: MazG family protein.
     
 0.841
Trad_2031
Protein of unknown function DUF152; COGs: COG1496 conserved hypothetical protein; InterPro IPR003730:IPR011324; KEGG: dra:DR_1966 hypothetical protein; PFAM: protein of unknown function DUF152; SPTR: C1XWL2 Putative uncharacterized protein; PFAM: Multi-copper polyphenol oxidoreductase laccase; TIGRFAM: conserved hypothetical protein TIGR00726; Belongs to the multicopper oxidase YfiH/RL5 family.
 
    0.641
trmB
Putative methyltransferase; Catalyzes the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA.
 
     0.631
Trad_2033
Excinuclease ABC C subunit domain protein; COGs: COG2827 endonuclease containing a URI domain; InterPro IPR000305; KEGG: mxa:MXAN_0472 GIY-YIG catalytic domain-containing protein; PFAM: Excinuclease ABC C subunit domain protein; SPTR: Q1DF31 GIY-YIG catalytic domain protein; PFAM: GIY-YIG catalytic domain.
       0.587
Trad_2032
DoxX family protein; COGs: COG4270 membrane protein; InterPro IPR011637; KEGG: npu:Npun_R3477 hypothetical protein; PFAM: DoxX family protein; SPTR: B2J134 Putative uncharacterized protein; PFAM: DoxX.
       0.574
Trad_2034
Protein of unknown function DUF1684; COGs: COG3358 conserved hypothetical protein; InterPro IPR012467; KEGG: dge:Dgeo_1648 hypothetical protein; PFAM: protein of unknown function DUF1684; SPTR: Q1IXU1 Putative uncharacterized protein; manually curated; PFAM: Protein of unknown function (DUF1684).
       0.574
Trad_2028
COGs: COG2074 2-phosphoglycerate kinase; InterPro IPR005144; KEGG: dra:DR_1514 2-phosphoglycerate kinase; SPTR: C1XL78 2-phosphoglycerate kinase; PFAM: Zeta toxin.
       0.570
Trad_2027
KEGG: ttj:TTHA1604 hypothetical protein; SPTR: Q72I92 Putative uncharacterized protein; PFAM: Protein of unknown function (DUF3467).
       0.429
Your Current Organism:
Truepera radiovictrix
NCBI taxonomy Id: 649638
Other names: T. radiovictrix DSM 17093, Truepera radiovictrix DSM 17093, Truepera radiovictrix RQ-24, Truepera radiovictrix str. DSM 17093, Truepera radiovictrix strain DSM 17093
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.