STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Trad_2610Hypothetical protein; InterPro IPR006311; KEGG: mul:MUL_3414 hypothetical protein; SPTR: A0PTC1 Hypothetical membrane protein. (263 aa)    
Predicted Functional Partners:
Trad_2609
Binding-protein-dependent transport systems inner membrane component; COGs: COG1178 ABC-type Fe3+ transport system permease component; InterPro IPR000515; KEGG: sgr:SGR_1856 putative ABC transporter permease protein; PFAM: binding-protein-dependent transport systems inner membrane component; SPTR: B5HFL2 ABC transporter integral membrane protein; PFAM: Binding-protein-dependent transport system inner membrane component.
       0.538
Trad_2608
PSP1 domain protein; COGs: COG1774 Uncharacterized homolog of PSP1; InterPro IPR007557; KEGG: dra:DR_2511 hypothetical protein; PFAM: PSP1 domain protein; SPTR: Q9RRI0 Putative uncharacterized protein; PFAM: PSP1 C-terminal conserved region.
       0.435
Your Current Organism:
Truepera radiovictrix
NCBI taxonomy Id: 649638
Other names: T. radiovictrix DSM 17093, Truepera radiovictrix DSM 17093, Truepera radiovictrix RQ-24, Truepera radiovictrix str. DSM 17093, Truepera radiovictrix strain DSM 17093
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.