STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADU30870.1KEGG: bpf:BpOF4_00790 hypothetical protein; TIGRFAM: sporulation integral membrane protein YlbJ; PFAM: nucleoside recognition domain protein. (415 aa)    
Predicted Functional Partners:
ADU29863.1
KEGG: bpf:BpOF4_13645 hypothetical protein.
 
   
 0.834
ADU29864.1
KEGG: bpf:BpOF4_13650 sporulation protein; TIGRFAM: sporulation protein YqfD; PFAM: stage IV sporulation YqfD.
 
   
 0.831
ADU32321.1
KEGG: bha:BH3773 stage II sporulation protein R; TIGRFAM: stage II sporulation protein R; PFAM: Sporulation stage II protein R.
  
   
 0.811
ADU30841.1
sigma-E processing peptidase SpoIIGA; Probable aspartic protease that is responsible for the proteolytic cleavage of the RNA polymerase sigma E factor (SigE/spoIIGB) to yield the active peptide in the mother cell during sporulation. Responds to a signal from the forespore that is triggered by the extracellular signal protein SpoIIR.
  
   
 0.801
ADU32276.1
TIGRFAM: sporulation transcriptional regulator SpoIIID; KEGG: btl:BALH_4786 stage III sporulation protein D.
  
  
 0.797
ADU29968.1
KEGG: bpf:BpOF4_01570 stage III sporulation protein AE; TIGRFAM: stage III sporulation protein AE; PFAM: Sporulation stage III protein AE.
  
    0.778
ADU30123.1
Stage IV sporulation protein A; ATPase. Has a role at an early stage in the morphogenesis of the spore coat.
  
   
 0.775
gpr
Spore protease; Initiates the rapid degradation of small, acid-soluble proteins during spore germination; Belongs to the peptidase A25 family.
  
     0.773
ADU29967.1
TIGRFAM: stage III sporulation protein AD; KEGG: bpf:BpOF4_01575 stage III sporulation protein AD.
  
     0.773
ADU30046.1
Stage II sporulation protein M; Required for complete septum migration and engulfment of the forespore compartment during sporulation. Required for stabilizing and recruiting of SpoIIP to the septal membrane.
  
   
 0.773
Your Current Organism:
Bacillus cellulosilyticus
NCBI taxonomy Id: 649639
Other names: B. cellulosilyticus DSM 2522, Bacillus cellulosilyticus DSM 2522, Bacillus cellulosilyticus str. DSM 2522, Bacillus cellulosilyticus strain DSM 2522, Bacillus sp. (STRAIN N-4), Bacillus sp. ATCC 21833, Bacillus sp. N-4
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