STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFR57768.1Membrane-anchored ribosome-binding protein, inhibits growth in stationary phase, ElaB/YqjD/DUF883 family. (107 aa)    
Predicted Functional Partners:
SFR57758.1
Hypothetical protein.
       0.789
SFR82312.1
Starvation-inducible DNA-binding protein; Belongs to the Dps family.
  
    0.599
SFR57782.1
Glycolate oxidase iron-sulfur subunit.
       0.535
SFR57793.1
Glycolate oxidase FAD binding subunit.
       0.521
SFR57809.1
Glycolate oxidase.
       0.521
SFR57822.1
Uncharacterized conserved protein GlcG, DUF336 family.
       0.425
SFR54209.1
Uncharacterized conserved protein YjbJ, UPF0337 family; Belongs to the UPF0337 (CsbD) family.
  
  
 0.420
SFR47387.1
CsbD-like; Belongs to the UPF0337 (CsbD) family.
  
  
 0.414
SFR53434.1
Peroxiredoxin, Ohr subfamily.
   
    0.408
Your Current Organism:
Marinobacter daqiaonensis
NCBI taxonomy Id: 650891
Other names: CGMCC 1.9167, LMG 25365, LMG:25365, M. daqiaonensis, Marinobacter daqiaonensis Qu et al. 2011, Marinobacter sp. YCSA40, NCCB 100308, strain YCSA40
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.