STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFZ44047.1KEGG: plm:Plim_1725 hypothetical protein; SPTR: Putative uncharacterized protein. (627 aa)    
Predicted Functional Partners:
AFZ44045.1
KEGG: cyn:Cyan7425_2191 hypothetical protein; SPTR: Putative uncharacterized protein.
       0.714
AFZ44046.1
KEGG: eli:ELI_12210 hypothetical protein; SPTR: Putative uncharacterized protein.
       0.714
AFZ44044.1
PFAM: Glycosyl transferases group 1; COGs: COG0438 Glycosyltransferase; InterPro IPR001296; KEGG: npu:Npun_R1491 glycosyl transferase, group 1; PFAM: glycosyl transferase group 1; SPTR: Putative uncharacterized protein.
 
     0.707
AFZ44026.1
KEGG: cyn:Cyan7425_2190 hypothetical protein; SPTR: Putative uncharacterized protein.
 
     0.679
AFZ44035.1
PFAM: Glycosyl transferases group 1; COGs: COG0438 Glycosyltransferase; InterPro IPR001296; KEGG: cyn:Cyan7425_2186 glycosyl transferase group 1; PFAM: glycosyl transferase group 1; SPTR: Putative glycosyltransferase.
 
     0.667
AFZ44051.1
PFAM: ABC transporter; COGs: COG1132 ABC-type multidrug transport system ATPase and permease components; InterPro IPR017871:IPR003593:IPR003439:IPR017940; KEGG: amr:AM1_3779 ABC transporter, ATP-binding protein; PFAM: ABC transporter related; SMART: AAA ATPase; SPTR: ATP-binding protein of ABC transporter.
 
     0.667
AFZ44031.1
PFAM: Glycosyl transferases group 1; COGs: COG0438 Glycosyltransferase; InterPro IPR001296; KEGG: cyn:Cyan7425_2189 glycosyl transferase group 1; PFAM: glycosyl transferase group 1; SPTR: Glycosyl transferase group 1.
 
     0.627
AFZ44037.1
PFAM: Glycosyl transferases group 1; COGs: COG0438 Glycosyltransferase; InterPro IPR001296; KEGG: ana:alr2860 hypothetical protein; PFAM: glycosyl transferase group 1; SPTR: Putative N-acetylglucosaminyltransferase.
 
     0.618
AFZ44950.1
KEGG: mar:MAE_15620 hypothetical protein; SPTR: S-layer domain protein.
  
   0.612
AFZ44043.1
PFAM: Glycosyl transferase family 2; COGs: COG0463 Glycosyltransferase involved in cell wall biogenesis; InterPro IPR001173; KEGG: cyn:Cyan7425_2164 glycosyl transferase family 2; PFAM: glycosyl transferase family 2; SPTR: Glycosyl transferase family 2.
       0.611
Your Current Organism:
Halothece sp. PCC7418
NCBI taxonomy Id: 65093
Other names: Aphanothece halophytica 7418, Cyanothece sp. PCC 7418, H. sp. PCC 7418, Halothece sp. PCC 7418, Synechococcus sp. ATCC 29534 (no longer available), Synechococcus sp. PCC 7418
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