STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
hbsCHbsC: hydroxybenzylsuccinate synthase, gamma subunit. (59 aa)    
Predicted Functional Partners:
hbsA
HbsA: hydroxybenzylsuccinate synthase, alpha subunit.
   
 
 0.873
bssA
BssA: benzylsuccinate synthase, alpha subunit.
   
 
 0.710
bssB
BssB: benzylsuccinate synthase, beta subunit.
    
 
 0.595
bssA3
BssA3: benzylsuccinate synthase, alpha subunit.
   
 
 0.569
pflD
PflD: pyruvate formate-lyase.
   
 
 0.569
hbsB2
HbsB2: predicted hydroxybenzylsuccinate synthase, beta subunit.
       0.407
Your Current Organism:
Desulfobacula toluolica
NCBI taxonomy Id: 651182
Other names: D. toluolica Tol2, Desulfobacula toluolica DSM 7467, Desulfobacula toluolica Tol2, Desulfobacula toluolica str. Tol2, Desulfobacula toluolica strain Tol2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.