STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADU43589.1PFAM: O-methyltransferase family 3; KEGG: bte:BTH_II0913 O-methyltransferase. (218 aa)    
Predicted Functional Partners:
ADU43590.1
PFAM: regulatory protein TetR; KEGG: bja:blr4230 transcriptional regulatory protein.
 
     0.892
ADU42726.1
PFAM: peptidase U32; KEGG: oca:OCAR_5037 peptidase U32.
  
  
 0.569
ADU42727.1
PFAM: peptidase U32; KEGG: oca:OCAR_5038 peptidase U32.
  
  
 0.569
ADU44511.1
PFAM: ETC complex I subunit conserved region; KEGG: bra:BRADO3676 putative ETC complex I subunit region protein (fragment).
  
  
 0.569
ADU43653.1
KEGG: bid:Bind_0846 amino acid adenylation domain-containing protein; TIGRFAM: amino acid adenylation domain protein; PFAM: AMP-dependent synthetase and ligase; Beta-ketoacyl synthase; Acyl transferase; phosphopantetheine-binding; aminotransferase class-III; condensation domain protein; Belongs to the ATP-dependent AMP-binding enzyme family.
 
   
 0.550
ADU43591.1
KEGG: cak:Caul_4714 hypothetical protein.
       0.516
ADU43588.1
KEGG: clo:HMPREF0868_0929 hypothetical protein.
       0.481
ADU43654.1
PFAM: condensation domain protein; Thioesterase; KEGG: bph:Bphy_1673 condensation domain-containing protein.
 
   
 0.448
Your Current Organism:
Rhodopseudomonas palustris DX1
NCBI taxonomy Id: 652103
Other names: R. palustris DX-1, Rhodopseudomonas palustris DX-1, Rhodopseudomonas palustris str. DX-1, Rhodopseudomonas palustris strain DX-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.