STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADU44984.1Nitrate ABC transporter, inner membrane subunit; KEGG: bbt:BBta_5414 putative nitrate ABC transporter (permease protein) (NtrB-like protein); TIGRFAM: nitrate ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component. (279 aa)    
Predicted Functional Partners:
ADU44983.1
KEGG: bja:bll5732 ABC transporter ATP-binding protein; PFAM: ABC transporter related; SMART: AAA ATPase.
 
 0.996
ADU44985.1
KEGG: bja:bll5734 ABC transporter nitrate-binding protein.
 
 
 0.992
cynS
Cyanate lyase; Catalyzes the reaction of cyanate with bicarbonate to produce ammonia and carbon dioxide; Belongs to the cyanase family.
 
   
 0.875
ADU42005.1
KEGG: msl:Msil_2834 twin-arginine translocation pathway signal.
 
  
 0.858
ADU43260.1
KEGG: bja:bll4572 putative nitrate transport protein.
 
  
 0.839
ADU44411.1
ABC transporter related protein; KEGG: mms:mma_3084 sulfonate/nitrate transport system ATP-binding protein; PFAM: ABC transporter related; SMART: AAA ATPase.
  
 0.831
ADU44413.1
SMART: extracellular solute-binding protein family 3; KEGG: mms:mma_3086 ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic component.
 
  
 0.812
ADU44045.1
KEGG: bra:BRADO4363 alkanesulfonate ABC transporter, ATP binding protein; PFAM: ABC transporter related; SMART: AAA ATPase.
  
 0.800
ADU45927.1
KEGG: ckr:CKR_0943 hypothetical protein; PFAM: ABC transporter related; SMART: AAA ATPase.
  
 0.799
ADU42006.1
KEGG: msl:Msil_2833 ABC transporter related; PFAM: ABC transporter related; SMART: AAA ATPase.
  
 0.724
Your Current Organism:
Rhodopseudomonas palustris DX1
NCBI taxonomy Id: 652103
Other names: R. palustris DX-1, Rhodopseudomonas palustris DX-1, Rhodopseudomonas palustris str. DX-1, Rhodopseudomonas palustris strain DX-1
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