STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A2C9KVK7Uncharacterized protein. (548 aa)    
Predicted Functional Partners:
A0A2C9JPR5
Uncharacterized protein.
   
 0.702
A0A2C9JK05
Uncharacterized protein.
   
 0.683
A0A2C9JKQ2
RNA-splicing ligase RtcB homolog; Catalytic subunit of the tRNA-splicing ligase complex that acts by directly joining spliced tRNA halves to mature-sized tRNAs by incorporating the precursor-derived splice junction phosphate into the mature tRNA as a canonical 3',5'-phosphodiester. May act as an RNA ligase with broad substrate specificity, and may function toward other RNAs; Belongs to the RtcB family.
 
  
   0.679
A0A2C9KB44
ARL2_Bind_BART domain-containing protein.
 
    
 0.670
A0A2C9JY48
Uncharacterized protein.
   
 0.627
A0A2C9JKP8
MRG domain-containing protein.
   
 
 0.592
A0A2C9JZS4
Methyltransferase-like protein; Belongs to the methyltransferase superfamily. METL family.
   
  
 0.587
A0A2C9JXU1
Uncharacterized protein.
    
 
 0.586
A0A2C9JQI2
RING-type domain-containing protein.
      
 0.573
A0A2C9JKH9
Uncharacterized protein.
      
 0.571
Your Current Organism:
Biomphalaria glabrata
NCBI taxonomy Id: 6526
Other names: Australorbis glabratus, B. glabrata, Planorbis glabratus, bloodfluke planorb
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