STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BN9_128480Retrotrans_gag domain-containing protein. (391 aa)    
Predicted Functional Partners:
BN9_133600
Uncharacterized protein.
    
 0.980
BN9_012080
dUTPase domain-containing protein.
    
 0.802
BN9_010960
Replication protein A subunit.
    
 0.785
BN9_106480
RPA_C domain-containing protein.
    
 0.755
BN9_106490
RPA_C domain-containing protein.
    
 0.755
BN9_129250
Glucanase; Belongs to the glycosyl hydrolase family 6.
    
 0.755
BN9_040890
ERCC4 domain-containing protein.
    
  0.702
BN9_101210
Med12-LCEWAV domain-containing protein.
    
 0.681
BN9_127410
Uncharacterized protein.
    
  0.625
BN9_020920
Uncharacterized protein.
    
  0.625
Your Current Organism:
Albugo candida
NCBI taxonomy Id: 65357
Other names: A. candida, Aecidium candidum
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.