STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADU65267.1PFAM: porin Gram-negative type; KEGG: tgr:Tgr7_2784 putative porin. (313 aa)    
Predicted Functional Partners:
ADU66081.1
KEGG: vvu:VV2_0373 WD-40 repeat-containing protein.
   
 
 0.793
ADU66304.1
KEGG: pca:Pcar_2975 TolB protein.
   
 
 0.793
ADU66336.1
PFAM: TonB-dependent receptor plug; TonB-dependent receptor; KEGG: dak:DaAHT2_1554 TonB-dependent receptor plug.
    
 
 0.768
ADU66188.1
PFAM: Disulphide bond isomerase, DsbC/G-like; KEGG: gsu:GSU0850 hypothetical protein.
  
  
 0.589
ADU65779.1
KEGG: hha:Hhal_1277 hypothetical protein.
   
 
 0.540
ADU65648.1
KEGG: dvm:DvMF_2121 2-alkenal reductase; PFAM: peptidase S1 and S6 chymotrypsin/Hap; SMART: PDZ/DHR/GLGF domain protein.
    
 
 0.527
ADU66497.1
SMART: PDZ/DHR/GLGF domain protein; TIGRFAM: protease Do; KEGG: gur:Gura_4295 protease Do; PFAM: peptidase S1 and S6 chymotrypsin/Hap; PDZ/DHR/GLGF domain protein.
    
 
 0.527
ADU67096.1
SMART: PDZ/DHR/GLGF domain protein; KEGG: pen:PSEEN2126 hypothetical protein.
    
 
 0.527
ADU66187.1
PFAM: OmpA/MotB domain protein; KEGG: vex:VEA_000499 outer membrane protein A precursor.
   
 
 0.506
pal
KEGG: glo:Glov_3469 peptidoglycan-associated lipoprotein; TIGRFAM: peptidoglycan-associated lipoprotein; PFAM: OmpA/MotB domain protein; Belongs to the Pal lipoprotein family.
   
 
 0.506
Your Current Organism:
Desulfurispirillum indicum
NCBI taxonomy Id: 653733
Other names: D. indicum S5, Desulfurispirillum indicum S5, Desulfurispirillum indicum str. S5, Desulfurispirillum indicum strain S5, bacterium S5, dissimilatory selenate-respiring bacterium S5
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