STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SER27372.1Hypothetical protein. (524 aa)    
Predicted Functional Partners:
SER59102.1
NADH-quinone oxidoreductase subunit F.
   
 0.958
SES17419.1
Alcohol dehydrogenase GroES-like domain-containing protein.
  
 0.885
SES37308.1
Acyl transferase domain-containing protein.
   
 0.874
SES41660.1
Acyl transferase domain-containing protein.
   
 0.874
rpsC
Small subunit ribosomal protein S3; Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation; Belongs to the universal ribosomal protein uS3 family.
    
 0.816
SER22426.1
Beta-ketoacyl synthase, N-terminal domain.
   
 0.802
SES17328.1
Acyl transferase domain-containing protein.
   
 0.802
SES17389.1
Acyl transferase domain-containing protein.
   
 0.802
SES36294.1
Acyl transferase domain-containing protein.
   
 0.802
SES41654.1
Acyl transferase domain-containing protein.
   
 0.802
Your Current Organism:
Lentzea albida
NCBI taxonomy Id: 65499
Other names: Asiosporangium albidum, DSM 44437, IFO 16102, JCM 10670, L. albida, Lentzea albida Labeda et al. 2001, NBRC 16102, NRRL B-24073, Saccharothrix aerocolonigenes subsp. staurosporea, Streptomyces stauroporeus, Streptomyces staurosporeus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.