STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SES40940.1Putative polyketide hydroxylase. (536 aa)    
Predicted Functional Partners:
SES40839.1
Right handed beta helix region.
 
  
  0.808
SES40891.1
2-polyprenyl-6-methoxyphenol hydroxylase.
 
     0.791
SES36722.1
Methyltransferase domain-containing protein.
  
 0.668
SER57442.1
Catechol 1,2-dioxygenase.
  
  
 0.637
SEQ23387.1
3-(3-hydroxy-phenyl)propionate hydroxylase.
  
  
 
0.630
SEQ77684.1
3-(3-hydroxy-phenyl)propionate hydroxylase.
  
  
 
0.622
SER10170.1
Salicylate hydroxylase.
  
     0.615
SES40933.1
3-oxoacyl-[acyl-carrier-protein] reductase.
 
  
  0.614
SES40925.1
Acyl carrier protein.
 
     0.607
SES40905.1
3-oxoacyl-[acyl-carrier-protein] synthase II; Belongs to the thiolase-like superfamily. Beta-ketoacyl-ACP synthases family.
 
    0.604
Your Current Organism:
Lentzea albida
NCBI taxonomy Id: 65499
Other names: Asiosporangium albidum, DSM 44437, IFO 16102, JCM 10670, L. albida, Lentzea albida Labeda et al. 2001, NBRC 16102, NRRL B-24073, Saccharothrix aerocolonigenes subsp. staurosporea, Streptomyces stauroporeus, Streptomyces staurosporeus
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