STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFN92804.1Peptidase family S41. (509 aa)    
Predicted Functional Partners:
SFO49990.1
Tetratricopeptide (TPR) repeat.
   
 
 0.811
SFN84571.1
4Fe-4S single cluster domain of Ferredoxin I.
   
   0.654
SFN84950.1
Pyruvate-ferredoxin/flavodoxin oxidoreductase.
    
   0.654
SFN57885.1
Aminopeptidase N.
    
 0.651
SFN83721.1
Chemotaxis protein MotC.
  
   0.631
SFO45155.1
Hypothetical protein.
  
   0.631
SFO78049.1
Carbohydrate binding domain-containing protein.
  
   0.631
SFO74781.1
Ca2+-binding protein, RTX toxin-related.
  
   0.631
SFP09055.1
Hypothetical protein.
  
   0.631
SFP15057.1
Hypothetical protein.
  
   0.631
Your Current Organism:
Cohaesibacter marisflavi
NCBI taxonomy Id: 655353
Other names: C. marisflavi, CGMCC 1.9157, Cohaesibacter marisflavi Qu et al. 2011, Cohaesibacter sp. DQHS21, NCCB 100300, strain DQHS21
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.