STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFO24231.1BMC domain-containing protein. (222 aa)    
Predicted Functional Partners:
SFO24144.1
Ethanolamine utilization protein EutN.
 
 
 0.984
SFO81489.1
Carboxysome shell and ethanolamine utilization microcompartment protein CcmL/EutN.
 
 
 
 0.955
SFO24253.1
Microcompartment protein PduB.
 
  
 0.950
SFO24206.1
Propanediol utilization protein; Involved in 1,2-propanediol (1,2-PD) degradation by catalyzing the conversion of propanoyl-CoA to propanoyl-phosphate.
 
  
 0.913
SFO24186.1
Ethanolamine utilization protein EutJ.
 
  
 0.902
SFO24108.1
Propionaldehyde dehydrogenase.
 
   
 0.894
SFO24085.1
BMC domain-containing protein.
 
   
 0.808
SFO24127.1
ATP:cob(I)alamin adenosyltransferase.
 
  
 0.785
SFO24278.1
BMC domain-containing protein.
 
    
0.705
SFO81515.1
Na+-translocating ferredoxin:NAD+ oxidoreductase RNF, RnfC subunit.
 
  
 0.698
Your Current Organism:
Cohaesibacter marisflavi
NCBI taxonomy Id: 655353
Other names: C. marisflavi, CGMCC 1.9157, Cohaesibacter marisflavi Qu et al. 2011, Cohaesibacter sp. DQHS21, NCCB 100300, strain DQHS21
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.