STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFO46141.1Hypothetical protein. (66 aa)    
Predicted Functional Partners:
SFO46162.1
Octaheme c-type cytochrome, tetrathionate reductase family.
       0.559
SFO46184.1
Thiosulfate reductase cytochrome b subunit.
       0.537
SFO46209.1
Hypothetical protein.
       0.537
SFO46232.1
Octaheme c-type cytochrome, tetrathionate reductase family.
       0.464
SFO46255.1
Thiosulfate reductase cytochrome b subunit.
       0.451
SFO46123.1
Aspartate aminotransferase.
       0.423
Your Current Organism:
Cohaesibacter marisflavi
NCBI taxonomy Id: 655353
Other names: C. marisflavi, CGMCC 1.9157, Cohaesibacter marisflavi Qu et al. 2011, Cohaesibacter sp. DQHS21, NCCB 100300, strain DQHS21
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.