STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFP06800.1Transcriptional regulator. (147 aa)    
Predicted Functional Partners:
SFO39711.1
His Kinase A (phospho-acceptor) domain-containing protein.
 
 0.951
SFO60929.1
Signal transduction histidine kinase.
  
 0.943
SFN78540.1
Two-component system, sensor histidine kinase RpfC.
 
 0.923
SFN96309.1
Na+/proline symporter.
  
 0.917
SFO60887.1
CheR methyltransferase, all-alpha domain.
 
 
 0.885
SFO51750.1
Two-component system, chemotaxis family, sensor kinase CheA.
  
 0.844
SFO62557.1
EAL domain, c-di-GMP-specific phosphodiesterase class I (or its enzymatically inactive variant).
   
 0.801
SFO61047.1
Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase.
  
 0.796
SFO14813.1
PAS domain S-box-containing protein.
 
 
 0.772
SFN78509.1
PAS domain S-box-containing protein/diguanylate cyclase (GGDEF) domain-containing protein.
   
 0.766
Your Current Organism:
Cohaesibacter marisflavi
NCBI taxonomy Id: 655353
Other names: C. marisflavi, CGMCC 1.9157, Cohaesibacter marisflavi Qu et al. 2011, Cohaesibacter sp. DQHS21, NCCB 100300, strain DQHS21
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