STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ZPR_0479Phosphoribosyltransferases family protein. (205 aa)    
Predicted Functional Partners:
ZPR_0078
Smf family protein.
 
 
 0.921
ZPR_0650
Competence protein.
 
  
 0.879
ZPR_2811
Magnesium chelatase, subunit ChlI.
 
  
 0.827
ZPR_4571
Restriction endonuclease-like protein; Belongs to the UPF0102 family.
 
    0.709
ZPR_3525
Prephenate dehydrogenase.
   
  
 0.673
ZPR_0477
Conserved hypothetical protein.
       0.655
ZPR_4014
DNA repair protein RadC.
 
    0.629
ZPR_4133
Putative DNA repair protein.
 
    0.627
ZPR_1095
ABC transporter, ATP-binding protein.
   
    0.624
ZPR_1151
Helix-hairpin-helix DNA-binding protein.
 
  
 0.622
Your Current Organism:
Zunongwangia profunda
NCBI taxonomy Id: 655815
Other names: Z. profunda SM-A87, Zunongwangia profunda SM-A87, Zunongwangia profunda str. SM-A87, Zunongwangia profunda strain SM-A87
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.