STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ZPR_0622CBS domain-containing protein. (218 aa)    
Predicted Functional Partners:
ZPR_0620
Conserved hypothetical protein.
 
     0.808
ZPR_0057
Protein containing tetratricopeptide region.
 
     0.740
ZPR_2861
Outer membrane lipoprotein carrier protein.
  
     0.719
ZPR_4624
Conserved hypothetical protein.
  
     0.714
ZPR_2752
Conserved hypothetical protein.
  
     0.705
ZPR_0947
Conserved hypothetical protein.
  
     0.694
ZPR_0843
tonB dependent receptor.
  
     0.688
ZPR_3783
Outer membrane transport protein.
 
     0.683
ZPR_3822
Gliding motility protein GldB.
  
     0.682
ZPR_0071
TPR repeat-containing protein.
 
     0.673
Your Current Organism:
Zunongwangia profunda
NCBI taxonomy Id: 655815
Other names: Z. profunda SM-A87, Zunongwangia profunda SM-A87, Zunongwangia profunda str. SM-A87, Zunongwangia profunda strain SM-A87
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.