STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ZPR_2996Xylulose kinase. (495 aa)    
Predicted Functional Partners:
xylA
Xylose isomerase; Belongs to the xylose isomerase family.
 
 
 0.998
ZPR_2147
L-ribulose-5-phosphate 4-epimerase.
  
 
 0.943
ZPR_0923
Ribulose-phosphate 3-epimerase; Belongs to the ribulose-phosphate 3-epimerase family.
 
 
 0.934
tal
Putative translaldolase; Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway; Belongs to the transaldolase family. Type 3B subfamily.
  
 
 0.733
ZPR_4358
Conserved hypothetical protein.
  
  
 0.726
ZPR_2951
Transcriptional regulator.
 
 
 
 0.721
ZPR_2152
Transcriptional regulator.
 
 
 
 0.720
ZPR_3031
Alanine racemase.
 
 
 
 0.710
ZPR_2902
Putative LacI-family transcriptional regulator.
 
 
 
 0.680
ZPR_2255
LacI family transcriptional regulator.
 
 
 
 0.662
Your Current Organism:
Zunongwangia profunda
NCBI taxonomy Id: 655815
Other names: Z. profunda SM-A87, Zunongwangia profunda SM-A87, Zunongwangia profunda str. SM-A87, Zunongwangia profunda strain SM-A87
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.