STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ZPR_3831Rho termination factor. (78 aa)    
Predicted Functional Partners:
ZPR_3832
Glyoxalase/bleomycin resistance protein/dioxygenase.
       0.778
ZPR_3833
Membrane protein, UPF0118.
       0.705
ZPR_3830
Ribosomal large subunit pseudouridine synthase F; Belongs to the pseudouridine synthase RsuA family.
       0.586
ZPR_1213
Conserved hypothetical protein.
 
     0.510
ZPR_3829
Hypothetical protein.
       0.470
ZPR_3834
Conserved hypothetical protein.
       0.464
ZPR_2715
C56 (PfpI) family peptidase.
 
     0.418
ZPR_0676
Permease.
  
     0.412
Your Current Organism:
Zunongwangia profunda
NCBI taxonomy Id: 655815
Other names: Z. profunda SM-A87, Zunongwangia profunda SM-A87, Zunongwangia profunda str. SM-A87, Zunongwangia profunda strain SM-A87
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