STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ZPR_4336Aldose 1-epimerase; Converts alpha-aldose to the beta-anomer. (401 aa)    
Predicted Functional Partners:
ZPR_2833
Galactokinase; Belongs to the GHMP kinase family. GalK subfamily.
 0.975
ZPR_2610
Secreted UDP-glucose 4-epimerase; Belongs to the NAD(P)-dependent epimerase/dehydratase family.
 
  
 0.913
ZPR_2494
ROK family protein.
  
 
 0.906
ZPR_4225
ROK family member transcriptional repressor.
  
 
 0.906
ZPR_4378
ROK family member transcriptional repressor.
  
 
 0.906
ZPR_3587
Haloacid dehalogenase-like hydrolase.
   
 
  0.902
ZPR_4335
Glutaminase.
  
  
 0.740
ZPR_4170
Putative exported beta-galactosidase; Belongs to the glycosyl hydrolase 35 family.
  
 
 0.682
ZPR_0911
Beta-galactosidase.
  
 
 0.671
ZPR_1008
Beta-galactosidase.
  
 
 0.671
Your Current Organism:
Zunongwangia profunda
NCBI taxonomy Id: 655815
Other names: Z. profunda SM-A87, Zunongwangia profunda SM-A87, Zunongwangia profunda str. SM-A87, Zunongwangia profunda strain SM-A87
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