MAC_03401 protein (Metarhizium acridum) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

MAC_03401

YT521-B-like family protein. (401 aa)

Predicted Functional Partners:

MAC_03108

0.843

MAC_01481

0.831

MAC_07463

0.822

MAC_07659

0.810

MAC_08162

0.710

MAC_00275

0.514

MAC_01383

0.496

MAC_04269

0.485

MAC_01915

0.443

MAC_06479

0.435

Your Current Organism:

Metarhizium acridum

NCBI taxonomy Id: 655827
Other names: M. acridum CQMa 102, Metarhizium acridum CQMa 102, Metarhizium anisopliae var. acridum CQMa 102

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
MAC_00275	MAC_03401	E9DRA6	E9E0K3	Rbm25 protein, putative.	YT521-B-like family protein.	0.514
MAC_01383	MAC_03401	E9DUT5	E9E0K3	Methyltransferase (Ncl1), putative; Belongs to the class I-like SAM-binding methyltransferase superfamily. RsmB/NOP family.	YT521-B-like family protein.	0.496
MAC_01481	MAC_01915	E9DUU8	E9DWB7	Cleavage and polyadenylation specificity factor subunit 2.	Phosphoglycerate mutase, 2,3-bisphosphoglycerate-independent.	0.661
MAC_01481	MAC_03108	E9DUU8	E9DZR0	Cleavage and polyadenylation specificity factor subunit 2.	Cleavage and polyadenylation specificity factor subunit 5; Component of the cleavage factor Im (CFIm) complex that functions as an activator of the pre-mRNA 3'-end cleavage and polyadenylation processing required for the maturation of pre-mRNA into functional mRNAs. CFIm contributes to the recruitment of multiprotein complexes on specific sequences on the pre-mRNA 3'-end, so called cleavage and polyadenylation signals (pA signals). Most pre-mRNAs contain multiple pA signals, resulting in alternative cleavage and polyadenylation (APA) producing mRNAs with variable 3'-end formation. The [...]	0.927
MAC_01481	MAC_03401	E9DUU8	E9E0K3	Cleavage and polyadenylation specificity factor subunit 2.	YT521-B-like family protein.	0.831
MAC_01481	MAC_06479	E9DUU8	E9E9D1	Cleavage and polyadenylation specificity factor subunit 2.	Poly(A) polymerase; Polymerase that creates the 3'-poly(A) tail of mRNA's.	0.952
MAC_01481	MAC_07463	E9DUU8	E9EC54	Cleavage and polyadenylation specificity factor subunit 2.	CFIA complex component Rna14.	0.949
MAC_01481	MAC_07659	E9DUU8	E9ECR1	Cleavage and polyadenylation specificity factor subunit 2.	Cleavage factor two protein 1.	0.999
MAC_01481	MAC_08162	E9DUU8	E9EE64	Cleavage and polyadenylation specificity factor subunit 2.	Fip1 domain-containing protein.	0.999
MAC_01915	MAC_01481	E9DWB7	E9DUU8	Phosphoglycerate mutase, 2,3-bisphosphoglycerate-independent.	Cleavage and polyadenylation specificity factor subunit 2.	0.661
MAC_01915	MAC_03108	E9DWB7	E9DZR0	Phosphoglycerate mutase, 2,3-bisphosphoglycerate-independent.	Cleavage and polyadenylation specificity factor subunit 5; Component of the cleavage factor Im (CFIm) complex that functions as an activator of the pre-mRNA 3'-end cleavage and polyadenylation processing required for the maturation of pre-mRNA into functional mRNAs. CFIm contributes to the recruitment of multiprotein complexes on specific sequences on the pre-mRNA 3'-end, so called cleavage and polyadenylation signals (pA signals). Most pre-mRNAs contain multiple pA signals, resulting in alternative cleavage and polyadenylation (APA) producing mRNAs with variable 3'-end formation. The [...]	0.738
MAC_01915	MAC_03401	E9DWB7	E9E0K3	Phosphoglycerate mutase, 2,3-bisphosphoglycerate-independent.	YT521-B-like family protein.	0.443
MAC_01915	MAC_06479	E9DWB7	E9E9D1	Phosphoglycerate mutase, 2,3-bisphosphoglycerate-independent.	Poly(A) polymerase; Polymerase that creates the 3'-poly(A) tail of mRNA's.	0.806
MAC_01915	MAC_07659	E9DWB7	E9ECR1	Phosphoglycerate mutase, 2,3-bisphosphoglycerate-independent.	Cleavage factor two protein 1.	0.947
MAC_01915	MAC_08162	E9DWB7	E9EE64	Phosphoglycerate mutase, 2,3-bisphosphoglycerate-independent.	Fip1 domain-containing protein.	0.954
MAC_03108	MAC_01481	E9DZR0	E9DUU8	Cleavage and polyadenylation specificity factor subunit 5; Component of the cleavage factor Im (CFIm) complex that functions as an activator of the pre-mRNA 3'-end cleavage and polyadenylation processing required for the maturation of pre-mRNA into functional mRNAs. CFIm contributes to the recruitment of multiprotein complexes on specific sequences on the pre-mRNA 3'-end, so called cleavage and polyadenylation signals (pA signals). Most pre-mRNAs contain multiple pA signals, resulting in alternative cleavage and polyadenylation (APA) producing mRNAs with variable 3'-end formation. The [...]	Cleavage and polyadenylation specificity factor subunit 2.	0.927
MAC_03108	MAC_01915	E9DZR0	E9DWB7	Cleavage and polyadenylation specificity factor subunit 5; Component of the cleavage factor Im (CFIm) complex that functions as an activator of the pre-mRNA 3'-end cleavage and polyadenylation processing required for the maturation of pre-mRNA into functional mRNAs. CFIm contributes to the recruitment of multiprotein complexes on specific sequences on the pre-mRNA 3'-end, so called cleavage and polyadenylation signals (pA signals). Most pre-mRNAs contain multiple pA signals, resulting in alternative cleavage and polyadenylation (APA) producing mRNAs with variable 3'-end formation. The [...]	Phosphoglycerate mutase, 2,3-bisphosphoglycerate-independent.	0.738
MAC_03108	MAC_03401	E9DZR0	E9E0K3	Cleavage and polyadenylation specificity factor subunit 5; Component of the cleavage factor Im (CFIm) complex that functions as an activator of the pre-mRNA 3'-end cleavage and polyadenylation processing required for the maturation of pre-mRNA into functional mRNAs. CFIm contributes to the recruitment of multiprotein complexes on specific sequences on the pre-mRNA 3'-end, so called cleavage and polyadenylation signals (pA signals). Most pre-mRNAs contain multiple pA signals, resulting in alternative cleavage and polyadenylation (APA) producing mRNAs with variable 3'-end formation. The [...]	YT521-B-like family protein.	0.843
MAC_03108	MAC_06479	E9DZR0	E9E9D1	Cleavage and polyadenylation specificity factor subunit 5; Component of the cleavage factor Im (CFIm) complex that functions as an activator of the pre-mRNA 3'-end cleavage and polyadenylation processing required for the maturation of pre-mRNA into functional mRNAs. CFIm contributes to the recruitment of multiprotein complexes on specific sequences on the pre-mRNA 3'-end, so called cleavage and polyadenylation signals (pA signals). Most pre-mRNAs contain multiple pA signals, resulting in alternative cleavage and polyadenylation (APA) producing mRNAs with variable 3'-end formation. The [...]	Poly(A) polymerase; Polymerase that creates the 3'-poly(A) tail of mRNA's.	0.725
MAC_03108	MAC_07463	E9DZR0	E9EC54	Cleavage and polyadenylation specificity factor subunit 5; Component of the cleavage factor Im (CFIm) complex that functions as an activator of the pre-mRNA 3'-end cleavage and polyadenylation processing required for the maturation of pre-mRNA into functional mRNAs. CFIm contributes to the recruitment of multiprotein complexes on specific sequences on the pre-mRNA 3'-end, so called cleavage and polyadenylation signals (pA signals). Most pre-mRNAs contain multiple pA signals, resulting in alternative cleavage and polyadenylation (APA) producing mRNAs with variable 3'-end formation. The [...]	CFIA complex component Rna14.	0.876