STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CMQ_7033Ff domain containing protein. (312 aa)    
Predicted Functional Partners:
CMQ_7483
Microfibrillar-associated protein.
   
 0.994
CMQ_4646
RNA-binding protein.
   
 0.991
CMQ_3898
C2h2 finger domain containing protein.
    
  0.989
CMQ_5116
Pre-mRNA splicing factor.
   
   0.985
CMQ_3088
Splicing factor 3b subunit.
   
 
 0.985
CMQ_5239
Pre-RNA splicing factor.
   
 0.984
CMQ_2827
Small nuclear ribonucleoprotein a.
   
 
 0.984
CMQ_2413
Splicing factor 3a subunit.
   
   0.984
CMQ_3967
Cell division control protein.
   
  0.983
CMQ_1248
Transcriptional regulator cwf13.
   
 0.983
Your Current Organism:
Grosmannia clavigera
NCBI taxonomy Id: 655863
Other names: G. clavigera kw1407, Grosmannia clavigera kw1407
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.