STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CMQ_6657NAD dependent epimerase. (347 aa)    
Predicted Functional Partners:
CMQ_7760
40S ribosomal protein s15; Belongs to the universal ribosomal protein uS19 family.
   
 0.916
CMQ_6557
40S ribosomal protein s10b.
   
 0.909
CMQ_7390
40S ribosomal protein s20.
   
 0.906
CMQ_2336
40S ribosomal protein S7; Belongs to the eukaryotic ribosomal protein eS7 family.
   
 0.902
CMQ_1499
40S ribosomal protein s3; Belongs to the universal ribosomal protein uS3 family.
   
 0.901
CMQ_6964
40S ribosomal protein S8; Belongs to the eukaryotic ribosomal protein eS8 family.
   
 0.898
CMQ_6984
40S ribosomal protein S25; Belongs to the eukaryotic ribosomal protein eS25 family.
   
 0.898
RPS1
40S ribosomal protein S1; Belongs to the eukaryotic ribosomal protein eS1 family.
   
 0.896
CMQ_6199
40S ribosomal protein.
   
 0.894
CMQ_2259
40S ribosomal protein s16; Belongs to the universal ribosomal protein uS9 family.
   
 0.887
Your Current Organism:
Grosmannia clavigera
NCBI taxonomy Id: 655863
Other names: G. clavigera kw1407, Grosmannia clavigera kw1407
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.