STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CMQ_4033Uncharacterized protein. (228 aa)    
Predicted Functional Partners:
CMQ_7414
Ap-2 adaptor complex subunit; Belongs to the adaptor complexes medium subunit family.
    
  0.568
CMQ_2652
Ubiquitin c-terminal hydrolase.
    
  0.550
CMQ_2530
Ubiquitin carboxyl-terminal hydrolase.
    
  0.550
CMQ_2056
Enth domain containing protein.
    
 0.530
CMQ_4038
ABC transporter.
    
 0.522
CMQ_7339
ABC transporter.
    
 0.522
CMQ_2155
Synaptobrevin.
    
  0.512
CMQ_7533
Derlin; May be involved in the degradation of misfolded endoplasmic reticulum (ER) luminal proteins; Belongs to the derlin family.
    
  0.498
CMQ_294
Derlin; May be involved in the degradation of misfolded endoplasmic reticulum (ER) luminal proteins; Belongs to the derlin family.
    
  0.498
CMQ_4199
C6 zinc finger domain containing protein.
    
 0.492
Your Current Organism:
Grosmannia clavigera
NCBI taxonomy Id: 655863
Other names: G. clavigera kw1407, Grosmannia clavigera kw1407
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.