STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CMQ_4201C2H2-type domain-containing protein. (1043 aa)    
Predicted Functional Partners:
CMQ_5067
37S ribosomal protein s16.
  
 
 0.958
CMQ_6084
37S ribosomal protein s9; Belongs to the universal ribosomal protein uS9 family.
  
 
 0.958
CMQ_4270
Mitochondrial ribosomal protein.
  
 
 0.958
CMQ_6866
50S ribosomal protein l24.
  
 
 0.956
CMQ_7390
40S ribosomal protein s20.
  
 
 0.954
CMQ_5698
50S ribosomal protein l17; Belongs to the bacterial ribosomal protein bL17 family.
   
 
 0.953
CMQ_7352
60S ribosomal protein l23.
   
 
 0.952
CMQ_7559
60S ribosomal protein; Belongs to the universal ribosomal protein uL15 family.
   
 
 0.947
CMQ_1499
40S ribosomal protein s3; Belongs to the universal ribosomal protein uS3 family.
   
 
 0.942
CMQ_6484
Elongation factor Tu; This protein promotes the GTP-dependent binding of aminoacyl- tRNA to the A-site of ribosomes during protein biosynthesis.
  
 0.939
Your Current Organism:
Grosmannia clavigera
NCBI taxonomy Id: 655863
Other names: G. clavigera kw1407, Grosmannia clavigera kw1407
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.