STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CMQ_1019Hlh transcription factor. (530 aa)    
Predicted Functional Partners:
CMQ_3824
Ribosomal protein; Belongs to the universal ribosomal protein uL1 family.
    
  0.785
CMQ_1328
Serine beta-lactamase-like superfamily protein.
    
  0.680
CMQ_669
Clathrin-coated vesicle protein.
    
  0.680
CMQ_7601
Mitochondrial large ribosomal subunit.
    
  0.680
CMQ_63
Glycogen synthase kinase; Belongs to the protein kinase superfamily.
    
 
 0.506
CMQ_209
Geranylgeranyl transferase type 1 beta subunit.
    
 
 0.501
CMQ_2728
Ubiquitin conjugating enzyme; Belongs to the ubiquitin-conjugating enzyme family.
    
  0.480
CMQ_5923
Ubiquitin conjugating enzyme.
    
  0.480
CMQ_2156
Ubiquitin conjugating enzyme.
    
  0.480
CMQ_6373
Ubiquitin conjugating enzyme; Belongs to the ubiquitin-conjugating enzyme family.
    
  0.480
Your Current Organism:
Grosmannia clavigera
NCBI taxonomy Id: 655863
Other names: G. clavigera kw1407, Grosmannia clavigera kw1407
Server load: low (28%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.