STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CMQ_2507Transcriptional co-activator. (463 aa)    
Predicted Functional Partners:
CMQ_1951
Transcription initiation factor tfiid subunit.
    
 0.996
CMQ_2443
Transcription initiation factor tfiid complex subunit.
    
 0.995
CMQ_578
Transcription initiation factor 31kd.
    
 0.994
CMQ_6284
Transcription initiation factor tfiid.
   
 0.994
CMQ_2015
Transcriptional activator spt7.
    
 0.994
CMQ_1090
Saga-like transcriptional regulatory complex subunit.
    
 0.993
CMQ_3441
Transcription initiation factor TFIID subunit 10; Functions as a component of the DNA-binding general transcription factor complex TFIID and the transcription regulatory histone acetylation (HAT) complexes SAGA and SLIK. Binding of TFIID to a promoter (with or without TATA element) is the initial step in preinitiation complex (PIC) formation. TFIID plays a key role in the regulation of gene expression by RNA polymerase II through different activities such as transcription activator interaction, core promoter recognition and selectivity, TFIIA and TFIIB interaction, chromatin modificati [...]
    
 0.990
CMQ_3373
Transcriptional regulator.
  
 
 0.980
CMQ_5851
Histone acetylase complex subunit; Belongs to the PI3/PI4-kinase family.
   
 0.978
CMQ_5476
Saga complex component.
    
 0.977
Your Current Organism:
Grosmannia clavigera
NCBI taxonomy Id: 655863
Other names: G. clavigera kw1407, Grosmannia clavigera kw1407
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.