STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CMQ_2908Ubiquitin conjugating enzyme. (182 aa)    
Predicted Functional Partners:
CMQ_4128
Ubiquitin-conjugating enzyme; Belongs to the complex I LYR family.
    
 0.911
CMQ_499
Poly(A)+ RNA transport protein; Belongs to the ubiquitin-activating E1 family.
   
 0.875
CMQ_3763
Ubiquitin-like modifier.
   
 0.849
CMQ_4958
Uncharacterized protein.
    
 0.828
CMQ_6126
Ubiquitin-conjugating enzyme h; Belongs to the ubiquitin-conjugating enzyme family.
   
 0.826
CMQ_4125
U-box domain protein.
    
 0.819
CMQ_7476
Ubiquitin-conjugating enzyme.
    
 0.818
CMQ_5954
An1-type zinc finger protein.
    
 0.815
CMQ_2436
Ubiquitin-conjugating enzyme.
   
 0.806
CMQ_740
DNA repair protein.
    
 0.804
Your Current Organism:
Grosmannia clavigera
NCBI taxonomy Id: 655863
Other names: G. clavigera kw1407, Grosmannia clavigera kw1407
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.