STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CMQ_2766U3 small nucleolar ribonucleoprotein protein MPP10; Involved in nucleolar processing of pre-18S ribosomal RNA. Belongs to the MPP10 family. (756 aa)    
Predicted Functional Partners:
CMQ_7004
Small nucleolar ribonucleoprotein complex component.
   
 0.999
CMQ_1277
U3 small nucleolar ribonucleoprotein protein imp4.
   
 0.999
CMQ_2631
U3 small nucleolar ribonucleoprotein protein imp3.
   
  0.999
CMQ_2703
Ribosome biogenesis protein.
   
 
 0.999
CMQ_1867
Small nucleolar ribonucleoprotein complex.
   
 0.999
CMQ_4814
Sas10 utp3 family protein.
  
 
 0.999
CMQ_3634
WD domain containing protein.
   
 0.998
CMQ_3043
Small nucleolar ribonucleoprotein complex subunit putatrive.
   
 
 0.998
CMQ_2068
U3 small nucleolar RNA-associated protein 22.
   
 0.998
CMQ_4064
Uncharacterized protein.
   
 
 0.997
Your Current Organism:
Grosmannia clavigera
NCBI taxonomy Id: 655863
Other names: G. clavigera kw1407, Grosmannia clavigera kw1407
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