STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CMQ_2838Exosome complex subunit. (229 aa)    
Predicted Functional Partners:
CMQ_4757
3 exoribonuclease family protein.
   
 0.999
CMQ_1131
3 exoribonuclease family protein.
   
 0.998
CMQ_3039
Exosome complex subunit.
   
 0.998
CMQ_8114
Exosome complex exonuclease.
   
 0.998
CMQ_5805
Exosome complex exonuclease.
   
 0.998
CMQ_5558
3 exoribonuclease family protein.
   
 0.998
CMQ_1192
Exosome subunit rrp45.
   
 0.996
CMQ_1101
Exosome complex exonuclease rrp41.
   
 0.996
CMQ_5582
Exosome-associated family protein.
   
 0.993
CMQ_6530
ATP-dependent RNA helicase dob1.
   
 0.980
Your Current Organism:
Grosmannia clavigera
NCBI taxonomy Id: 655863
Other names: G. clavigera kw1407, Grosmannia clavigera kw1407
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.