STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CMQ_6219Uncharacterized protein. (1487 aa)    
Predicted Functional Partners:
CMQ_2183
Ribosomal assembly complex component.
   
 0.620
CMQ_5791
rRNA processing protein.
    
 0.606
NOP7
Pescadillo homolog; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome.
   
 0.558
CMQ_5581
Uncharacterized protein.
  
 
  0.500
ERB1
Ribosome biogenesis protein ERB1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome.
   
  0.496
CMQ_177
40S ribosomal protein s14; Belongs to the universal ribosomal protein uS11 family.
    
  0.493
CMQ_4150
Uncharacterized protein.
  
 
  0.491
CMQ_1965
RNA processing protein.
    
  0.489
CMQ_4867
Ulp1 protease family protein.
    
  0.489
CMQ_3602
Myosin regulatory light chain cdc4.
    
  0.487
Your Current Organism:
Grosmannia clavigera
NCBI taxonomy Id: 655863
Other names: G. clavigera kw1407, Grosmannia clavigera kw1407
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.