STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CMQ_6196Amidase. (566 aa)    
Predicted Functional Partners:
CMQ_5456
Glutamyl-tRNA b subunit.
 0.947
CMQ_1891
Aspartyl-tRNA synthetase.
  
 0.794
CMQ_1237
Glutaminyl-tRNA synthetase; Belongs to the class-I aminoacyl-tRNA synthetase family.
  
 0.678
CMQ_7301
Glutamyl-tRNA synthetase; Belongs to the class-I aminoacyl-tRNA synthetase family.
  
 0.678
CMQ_3876
Nitrilase cyanide hydratase and apolipoprotein n-acyltransferase.
    
 0.666
CMQ_5664
Aspartyl-tRNA synthetase.
  
 0.639
CMQ_5405
Asparaginyl-tRNA synthetase.
   
 0.618
CMQ_2659
Asparaginyl-tRNA synthetase.
  
 0.618
CMQ_4729
Uncharacterized protein.
   
 0.618
CMQ_6446
7-alpha-hydroxysteroid dehydrogenase; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
 
 
    0.605
Your Current Organism:
Grosmannia clavigera
NCBI taxonomy Id: 655863
Other names: G. clavigera kw1407, Grosmannia clavigera kw1407
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