STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CMQ_7214Beta-xylosidase; Belongs to the glycosyl hydrolase 43 family. (561 aa)    
Predicted Functional Partners:
CMQ_6010
Vacuolar protein sorting-associated protein.
 
      0.734
CMQ_3603
Polyketide synthase.
  
 0.647
CMQ_7050
Beta-ketoacyl synthase; Belongs to the thiolase-like superfamily. Beta-ketoacyl-ACP synthases family.
  
 0.582
CMQ_3001
Acyl-CoA desaturase; Stearyl-CoA desaturase that utilizes O(2) and electrons from reduced cytochrome b5 to introduce the first double bond into saturated fatty acyl-CoA substrates.
   
 0.576
CMQ_1395
Metallo-beta-lactamase superfamily protein.
   
 0.558
CMQ_7462
2Fe-2S iron-sulfur cluster-binding domain containing protein.
   
 0.558
CMQ_6588
Sterol carrier protein; Belongs to the thiolase-like superfamily. Thiolase family.
   
 0.538
CMQ_6185
Ankyrin repeat-containing protein.
    
  0.522
CMQ_7861
Peroxisomal targeting signal receptor.
    
  0.512
CMQ_3766
N-sulfoglucosamine sulfohydrolase.
   
   0.504
Your Current Organism:
Grosmannia clavigera
NCBI taxonomy Id: 655863
Other names: G. clavigera kw1407, Grosmannia clavigera kw1407
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