STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CMQ_7477Lectin family integral membrane. (317 aa)    
Predicted Functional Partners:
CMQ_6298
Protein transport protein SEC23; Component of the coat protein complex II (COPII) which promotes the formation of transport vesicles from the endoplasmic reticulum (ER). The coat has two main functions, the physical deformation of the endoplasmic reticulum membrane into vesicles and the selection of cargo molecules; Belongs to the SEC23/SEC24 family. SEC23 subfamily.
   
 0.777
CMQ_5858
Endosomal cargo receptor.
   
 0.773
CMQ_955
Endosomal cargo receptor.
   
 0.756
CMQ_1027
Protein transport protein sec22; Belongs to the synaptobrevin family.
    
 0.688
CMQ_1839
Protein transport protein.
    
 0.681
CMQ_3593
Golgi reassembly stacking protein.
   
  0.680
CMQ_4508
Snare complex subunit.
   
 
 0.675
CMQ_4006
Nuclear pore complex protein; Belongs to the WD repeat SEC13 family.
   
 0.651
CMQ_5144
Er-golgi snare complex subunit.
     
 0.643
CMQ_1272
Protein transport protein BOS1; SNARE required for protein transport between the ER and the Golgi complex.
   
 
 0.643
Your Current Organism:
Grosmannia clavigera
NCBI taxonomy Id: 655863
Other names: G. clavigera kw1407, Grosmannia clavigera kw1407
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